Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN4P51793 AC078991.1-201ENST00000437297 610 ntBASIC15.57■□□□□ 0.08
CLCN4P51793 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.57■□□□□ 0.08
CLCN4P51793 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN4P51793 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN4P51793 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.57■□□□□ 0.08
CLCN4P51793 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.57■□□□□ 0.08
CLCN4P51793 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN4P51793 AC087045.2-201ENST00000606279 1003 ntBASIC15.57■□□□□ 0.08
CLCN4P51793 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN4P51793 AC006486.2-201ENST00000624246 2199 ntBASIC15.57■□□□□ 0.08
CLCN4P51793 FRMPD2B-201ENST00000431305 1347 ntBASIC15.57■□□□□ 0.08
CLCN4P51793 CAP2P1-201ENST00000557743 1390 ntBASIC15.57■□□□□ 0.08
CLCN4P51793 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCN4P51793 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN4P51793 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN4P51793 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CLCN4P51793 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCN4P51793 AC103702.1-201ENST00000548801 2630 ntBASIC15.57■□□□□ 0.08
CLCN4P51793 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN4P51793 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN4P51793 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN4P51793 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN4P51793 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CLCN4P51793 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN4P51793 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN4P51793 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 AC023157.3-201ENST00000619086 2088 ntBASIC15.56■□□□□ 0.08
CLCN4P51793 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CLCN4P51793 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CLCN4P51793 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCN4P51793 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.56■□□□□ 0.08
CLCN4P51793 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCN4P51793 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CLCN4P51793 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.56■□□□□ 0.08
CLCN4P51793 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.56■□□□□ 0.08
CLCN4P51793 AC026320.2-201ENST00000434379 478 ntBASIC15.56■□□□□ 0.08
CLCN4P51793 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLCN4P51793 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CLCN4P51793 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.56■□□□□ 0.08
CLCN4P51793 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.56■□□□□ 0.08
CLCN4P51793 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.56■□□□□ 0.08
CLCN4P51793 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.56■□□□□ 0.08
CLCN4P51793 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.56■□□□□ 0.08
CLCN4P51793 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CLCN4P51793 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCN4P51793 MIR6769A-201ENST00000617340 73 ntBASIC15.56■□□□□ 0.08
CLCN4P51793 AC133540.1-201ENST00000620845 1019 ntBASIC15.56■□□□□ 0.08
CLCN4P51793 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCN4P51793 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLCN4P51793 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.56■□□□□ 0.08
CLCN4P51793 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN4P51793 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CLCN4P51793 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 C18orf15-201ENST00000623680 2534 ntBASIC15.55■□□□□ 0.08
CLCN4P51793 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.55■□□□□ 0.08
CLCN4P51793 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CLCN4P51793 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 AC007292.2-201ENST00000593524 1812 ntBASIC15.55■□□□□ 0.08
CLCN4P51793 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CLCN4P51793 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.55■□□□□ 0.08
CLCN4P51793 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 AC126365.1-201ENST00000578585 1514 ntBASIC15.55■□□□□ 0.08
CLCN4P51793 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLCN4P51793 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms