Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL691447.1-201ENST00000419456 387 ntBASIC13.95□□□□□ -0.18
RNF144AP50876 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF144AP50876 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF144AP50876 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF144AP50876 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 AL033527.5-201ENST00000641382 801 ntBASIC13.95□□□□□ -0.18
RNF144AP50876 AC055811.4-201ENST00000624039 1754 ntBASIC13.95□□□□□ -0.18
RNF144AP50876 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
RNF144AP50876 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF144AP50876 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RNF144AP50876 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
RNF144AP50876 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.94□□□□□ -0.18
RNF144AP50876 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF144AP50876 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF144AP50876 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNF144AP50876 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF144AP50876 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF144AP50876 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
RNF144AP50876 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF144AP50876 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF144AP50876 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF144AP50876 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF144AP50876 AC026434.2-201ENST00000506094 1078 ntBASIC13.94□□□□□ -0.18
RNF144AP50876 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF144AP50876 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF144AP50876 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF144AP50876 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.94□□□□□ -0.18
RNF144AP50876 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF144AP50876 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF144AP50876 RN7SL718P-201ENST00000581254 303 ntBASIC13.94□□□□□ -0.18
RNF144AP50876 AC004466.1-201ENST00000599515 1080 ntBASIC13.94□□□□□ -0.18
RNF144AP50876 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF144AP50876 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNF144AP50876 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNF144AP50876 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF144AP50876 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNF144AP50876 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF144AP50876 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF144AP50876 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RNF144AP50876 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF144AP50876 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF144AP50876 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF144AP50876 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF144AP50876 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF144AP50876 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RNF144AP50876 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms