Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ZBED1P1-201ENST00000502364 1930 ntBASIC13.91□□□□□ -0.18
PRKCAP17252 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCAP17252 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.91□□□□□ -0.18
PRKCAP17252 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCAP17252 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCAP17252 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCAP17252 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PRKCAP17252 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.91□□□□□ -0.18
PRKCAP17252 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCAP17252 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCAP17252 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.91□□□□□ -0.18
PRKCAP17252 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
PRKCAP17252 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PRKCAP17252 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCAP17252 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCAP17252 LINC01230-201ENST00000625222 3017 ntBASIC13.9□□□□□ -0.18
PRKCAP17252 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 AL158070.2-201ENST00000623713 1621 ntBASIC13.9□□□□□ -0.18
PRKCAP17252 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.9□□□□□ -0.18
PRKCAP17252 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.9□□□□□ -0.18
PRKCAP17252 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.9□□□□□ -0.18
PRKCAP17252 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PRKCAP17252 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 AL645937.2-201ENST00000396808 931 ntBASIC13.9□□□□□ -0.18
PRKCAP17252 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.9□□□□□ -0.18
PRKCAP17252 AL162726.2-201ENST00000438986 1017 ntBASIC13.9□□□□□ -0.18
PRKCAP17252 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.9□□□□□ -0.18
PRKCAP17252 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 AP001582.1-201ENST00000525856 295 ntBASIC13.9□□□□□ -0.18
PRKCAP17252 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.9□□□□□ -0.18
PRKCAP17252 ENPP7P5-201ENST00000541031 1031 ntBASIC13.9□□□□□ -0.18
PRKCAP17252 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.9□□□□□ -0.18
PRKCAP17252 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.9□□□□□ -0.18
PRKCAP17252 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.9□□□□□ -0.18
PRKCAP17252 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.9□□□□□ -0.18
PRKCAP17252 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 CU634019.7-201ENST00000624153 1185 ntBASIC13.9□□□□□ -0.18
PRKCAP17252 FP236241.2-201ENST00000624906 1185 ntBASIC13.9□□□□□ -0.18
PRKCAP17252 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 AL033527.5-201ENST00000641382 801 ntBASIC13.9□□□□□ -0.18
PRKCAP17252 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PRKCAP17252 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.9□□□□□ -0.18
PRKCAP17252 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.9□□□□□ -0.18
PRKCAP17252 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCAP17252 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.9□□□□□ -0.18
PRKCAP17252 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PRKCAP17252 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
PRKCAP17252 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PRKCAP17252 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PRKCAP17252 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCAP17252 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
PRKCAP17252 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms