Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RETP07949 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RETP07949 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
RETP07949 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.03■□□□□ -0
RETP07949 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RETP07949 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.03■□□□□ -0
RETP07949 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 RN7SKP214-201ENST00000364208 315 ntBASIC15.03■□□□□ -0
RETP07949 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 ISCA2P1-201ENST00000425548 448 ntBASIC15.03■□□□□ -0
RETP07949 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.03■□□□□ -0
RETP07949 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.03■□□□□ -0
RETP07949 AC004066.1-201ENST00000502488 802 ntBASIC15.03■□□□□ -0
RETP07949 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 AC005324.6-201ENST00000587972 613 ntBASIC15.03■□□□□ -0
RETP07949 AC090164.2-201ENST00000611487 516 ntBASIC15.03■□□□□ -0
RETP07949 MIR6756-201ENST00000616240 63 ntBASIC15.03■□□□□ -0
RETP07949 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.03■□□□□ -0
RETP07949 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.03■□□□□ -0
RETP07949 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.02■□□□□ -0
RETP07949 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
RETP07949 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.02■□□□□ -0
RETP07949 AC126365.1-201ENST00000578585 1514 ntBASIC15.02■□□□□ -0
RETP07949 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RETP07949 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RETP07949 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.02■□□□□ -0
RETP07949 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RETP07949 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.02■□□□□ -0
RETP07949 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.02■□□□□ -0
RETP07949 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RETP07949 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RETP07949 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.02■□□□□ -0
RETP07949 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RETP07949 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
RETP07949 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.02■□□□□ -0
RETP07949 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RETP07949 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
RETP07949 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RETP07949 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.02■□□□□ -0
RETP07949 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.02■□□□□ -0
RETP07949 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.02■□□□□ -0
RETP07949 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.02■□□□□ -0
RETP07949 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.02■□□□□ -0
RETP07949 RPL7P35-201ENST00000446943 740 ntBASIC15.02■□□□□ -0
RETP07949 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RETP07949 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.02■□□□□ -0
RETP07949 RPL18P13-201ENST00000478088 569 ntBASIC15.02■□□□□ -0
RETP07949 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.02■□□□□ -0
RETP07949 AC022616.1-201ENST00000518688 554 ntBASIC15.02■□□□□ -0
RETP07949 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.02■□□□□ -0
RETP07949 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.02■□□□□ -0
RETP07949 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RETP07949 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.02■□□□□ -0
RETP07949 AC103810.10-201ENST00000606504 343 ntBASIC15.02■□□□□ -0
RETP07949 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.02■□□□□ -0
RETP07949 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.02■□□□□ -0
RETP07949 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RETP07949 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RETP07949 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RETP07949 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RETP07949 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RETP07949 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RETP07949 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RETP07949 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RETP07949 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RETP07949 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RETP07949 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RETP07949 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.02□□□□□ -0.01
RETP07949 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RETP07949 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.02□□□□□ -0.01
RETP07949 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RETP07949 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.02□□□□□ -0.01
RETP07949 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RETP07949 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms