Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 AC004890.2-204ENST00000481968 304 ntBASIC13.48□□□□□ -0.25
HLA-DQA2P01906 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 BX640514.1-201ENST00000583223 1918 ntBASIC13.48□□□□□ -0.25
HLA-DQA2P01906 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA2P01906 DRD5P1-201ENST00000456605 1438 ntBASIC13.47□□□□□ -0.25
HLA-DQA2P01906 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 SPDYE19P-201ENST00000338590 713 ntBASIC13.47□□□□□ -0.25
HLA-DQA2P01906 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 VDAC1P7-201ENST00000462417 847 ntBASIC13.47□□□□□ -0.25
HLA-DQA2P01906 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA2P01906 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 AC018665.1-201ENST00000622927 1362 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms