Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.49□□□□□ -0.09
TNFP01375 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.49□□□□□ -0.09
TNFP01375 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
TNFP01375 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
TNFP01375 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.49□□□□□ -0.09
TNFP01375 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.49□□□□□ -0.09
TNFP01375 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.49□□□□□ -0.09
TNFP01375 AP001505.2-201ENST00000616815 443 ntBASIC14.49□□□□□ -0.09
TNFP01375 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.49□□□□□ -0.09
TNFP01375 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.49□□□□□ -0.09
TNFP01375 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TNFP01375 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TNFP01375 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
TNFP01375 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TNFP01375 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TNFP01375 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.49□□□□□ -0.09
TNFP01375 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.49□□□□□ -0.09
TNFP01375 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
TNFP01375 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TNFP01375 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 MBLAC2-202ENST00000514906 1936 ntBASIC14.49□□□□□ -0.09
TNFP01375 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TNFP01375 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFP01375 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.49□□□□□ -0.09
TNFP01375 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TNFP01375 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFP01375 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 LINC00554-201ENST00000564841 3011 ntBASIC14.48□□□□□ -0.09
TNFP01375 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
TNFP01375 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFP01375 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFP01375 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
TNFP01375 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 RN7SKP214-201ENST00000364208 315 ntBASIC14.48□□□□□ -0.09
TNFP01375 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFP01375 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFP01375 AL157407.1-201ENST00000435784 904 ntBASIC14.48□□□□□ -0.09
TNFP01375 VDAC1P1-201ENST00000439229 848 ntBASIC14.48□□□□□ -0.09
TNFP01375 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.48□□□□□ -0.09
TNFP01375 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 UPF3AP2-201ENST00000457924 1132 ntBASIC14.48□□□□□ -0.09
TNFP01375 AC245884.6-201ENST00000515672 1067 ntBASIC14.48□□□□□ -0.09
TNFP01375 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.48□□□□□ -0.09
TNFP01375 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 AL132994.2-201ENST00000603120 687 ntBASIC14.48□□□□□ -0.09
TNFP01375 AC106872.11-201ENST00000605838 421 ntBASIC14.48□□□□□ -0.09
TNFP01375 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
TNFP01375 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFP01375 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFP01375 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 AC006486.2-201ENST00000624246 2199 ntBASIC14.48□□□□□ -0.09
TNFP01375 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.48□□□□□ -0.09
TNFP01375 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.48□□□□□ -0.09
TNFP01375 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFP01375 AC092135.3-201ENST00000624151 1846 ntBASIC14.48□□□□□ -0.09
TNFP01375 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFP01375 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFP01375 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.47□□□□□ -0.09
TNFP01375 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFP01375 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.47□□□□□ -0.09
TNFP01375 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.47□□□□□ -0.09
TNFP01375 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFP01375 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TNFP01375 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFP01375 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TNFP01375 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFP01375 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFP01375 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TNFP01375 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.47□□□□□ -0.09
TNFP01375 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms