Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
ZNF253O75346 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
ZNF253O75346 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ZNF253O75346 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.71□□□□□ -0.53
ZNF253O75346 CSPG4P11-201ENST00000560634 4910 ntBASIC11.71□□□□□ -0.53
ZNF253O75346 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.71□□□□□ -0.53
ZNF253O75346 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
ZNF253O75346 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ZNF253O75346 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.71□□□□□ -0.53
ZNF253O75346 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ZNF253O75346 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ZNF253O75346 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
ZNF253O75346 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ZNF253O75346 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ZNF253O75346 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ZNF253O75346 AC074338.1-201ENST00000416825 156 ntBASIC11.71□□□□□ -0.53
ZNF253O75346 RBPMS2P1-201ENST00000437762 623 ntBASIC11.71□□□□□ -0.53
ZNF253O75346 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ZNF253O75346 MTND6P24-201ENST00000440466 518 ntBASIC11.71□□□□□ -0.53
ZNF253O75346 SPDYE14P-201ENST00000442619 822 ntBASIC11.71□□□□□ -0.53
ZNF253O75346 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.71□□□□□ -0.53
ZNF253O75346 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ZNF253O75346 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.71□□□□□ -0.53
ZNF253O75346 YBX1P5-201ENST00000509441 847 ntBASIC11.71□□□□□ -0.53
ZNF253O75346 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC11.71□□□□□ -0.53
ZNF253O75346 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.71□□□□□ -0.53
ZNF253O75346 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.71□□□□□ -0.53
ZNF253O75346 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
ZNF253O75346 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.71□□□□□ -0.53
ZNF253O75346 AC025181.2-201ENST00000606994 802 ntBASIC11.71□□□□□ -0.53
ZNF253O75346 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.71□□□□□ -0.53
ZNF253O75346 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.71□□□□□ -0.53
ZNF253O75346 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
ZNF253O75346 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
ZNF253O75346 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.71□□□□□ -0.53
ZNF253O75346 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ZNF253O75346 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
ZNF253O75346 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ZNF253O75346 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
ZNF253O75346 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
ZNF253O75346 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
ZNF253O75346 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.71□□□□□ -0.54
ZNF253O75346 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
ZNF253O75346 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ZNF253O75346 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ZNF253O75346 CETN4P-206ENST00000642099 2168 ntBASIC11.71□□□□□ -0.54
ZNF253O75346 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ZNF253O75346 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.71□□□□□ -0.54
ZNF253O75346 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
ZNF253O75346 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.71□□□□□ -0.54
ZNF253O75346 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ZNF253O75346 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ZNF253O75346 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ZNF253O75346 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
ZNF253O75346 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ZNF253O75346 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.7□□□□□ -0.54
ZNF253O75346 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.7□□□□□ -0.54
ZNF253O75346 AL591122.2-201ENST00000624125 1853 ntBASIC11.7□□□□□ -0.54
ZNF253O75346 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
ZNF253O75346 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.7□□□□□ -0.54
ZNF253O75346 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.7□□□□□ -0.54
ZNF253O75346 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 RPL30-202ENST00000396070 440 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 TOMM22P5-201ENST00000416399 439 ntBASIC11.7□□□□□ -0.54
ZNF253O75346 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.7□□□□□ -0.54
ZNF253O75346 FAM58DP-201ENST00000428076 619 ntBASIC11.7□□□□□ -0.54
ZNF253O75346 GPS2P2-201ENST00000430745 888 ntBASIC11.7□□□□□ -0.54
ZNF253O75346 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms