Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 KRT18P36-201ENST00000411618 1276 ntBASIC15.81■□□□□ 0.12
HOXA2O43364 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 RPL8P2-201ENST00000430538 502 ntBASIC15.81■□□□□ 0.12
HOXA2O43364 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXA2O43364 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.81■□□□□ 0.12
HOXA2O43364 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 RN7SL181P-201ENST00000462921 277 ntBASIC15.81■□□□□ 0.12
HOXA2O43364 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
HOXA2O43364 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.81■□□□□ 0.12
HOXA2O43364 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 PHBP15-201ENST00000574228 665 ntBASIC15.81■□□□□ 0.12
HOXA2O43364 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXA2O43364 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
HOXA2O43364 KRT18P9-201ENST00000604826 1300 ntBASIC15.81■□□□□ 0.12
HOXA2O43364 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HOXA2O43364 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.81■□□□□ 0.12
HOXA2O43364 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.81■□□□□ 0.12
HOXA2O43364 AC092299.1-201ENST00000632679 757 ntBASIC15.81■□□□□ 0.12
HOXA2O43364 AC022726.2-201ENST00000634673 547 ntBASIC15.81■□□□□ 0.12
HOXA2O43364 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC15.81■□□□□ 0.12
HOXA2O43364 AL805961.1-201ENST00000642026 753 ntBASIC15.81■□□□□ 0.12
HOXA2O43364 PKD1P5-201ENST00000532415 10291 ntBASIC15.81■□□□□ 0.12
HOXA2O43364 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXA2O43364 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HOXA2O43364 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HOXA2O43364 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXA2O43364 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
HOXA2O43364 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HOXA2O43364 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXA2O43364 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 KRT8P28-201ENST00000433288 1390 ntBASIC15.8■□□□□ 0.12
HOXA2O43364 AC074138.1-201ENST00000611182 1303 ntBASIC15.8■□□□□ 0.12
HOXA2O43364 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 OR2K2-202ENST00000374428 1038 ntBASIC15.8■□□□□ 0.12
HOXA2O43364 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.8■□□□□ 0.12
HOXA2O43364 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.8■□□□□ 0.12
HOXA2O43364 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXA2O43364 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXA2O43364 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.8■□□□□ 0.12
HOXA2O43364 AC093752.3-201ENST00000567343 901 ntBASIC15.8■□□□□ 0.12
HOXA2O43364 MIR3677-201ENST00000578964 60 ntBASIC15.8■□□□□ 0.12
HOXA2O43364 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 MEG3_2.1-201ENST00000611456 105 ntBASIC15.8■□□□□ 0.12
HOXA2O43364 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXA2O43364 AC011491.1-203ENST00000637688 543 ntBASIC15.8■□□□□ 0.12
HOXA2O43364 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXA2O43364 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXA2O43364 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HOXA2O43364 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HOXA2O43364 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXA2O43364 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HOXA2O43364 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXA2O43364 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXA2O43364 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXA2O43364 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXA2O43364 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HOXA2O43364 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXA2O43364 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HOXA2O43364 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HOXA2O43364 LINC01165-201ENST00000445190 1623 ntBASIC15.79■□□□□ 0.12
HOXA2O43364 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXA2O43364 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HOXA2O43364 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HOXA2O43364 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HOXA2O43364 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms