Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA9Q9Y5H5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDHA9Q9Y5H5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA9Q9Y5H5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PCDHA9Q9Y5H5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PCDHA9Q9Y5H5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA9Q9Y5H5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA9Q9Y5H5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA9Q9Y5H5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHA9Q9Y5H5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PCDHA9Q9Y5H5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHA9Q9Y5H5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHA9Q9Y5H5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PCDHA9Q9Y5H5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA9Q9Y5H5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22■■□□□ 1.11
PCDHA9Q9Y5H5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHA9Q9Y5H5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22■■□□□ 1.11
PCDHA9Q9Y5H5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22■■□□□ 1.11
PCDHA9Q9Y5H5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22■■□□□ 1.11
PCDHA9Q9Y5H5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PCDHA9Q9Y5H5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA9Q9Y5H5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHA9Q9Y5H5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PCDHA9Q9Y5H5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22■■□□□ 1.11
PCDHA9Q9Y5H5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 AC011551.1-201ENST00000614101 683 ntBASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHA9Q9Y5H5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
PCDHA9Q9Y5H5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHA9Q9Y5H5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHA9Q9Y5H5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PCDHA9Q9Y5H5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PCDHA9Q9Y5H5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHA9Q9Y5H5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCDHA9Q9Y5H5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA9Q9Y5H5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
PCDHA9Q9Y5H5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
PCDHA9Q9Y5H5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PCDHA9Q9Y5H5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA9Q9Y5H5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA9Q9Y5H5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA9Q9Y5H5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA9Q9Y5H5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA9Q9Y5H5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA9Q9Y5H5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA9Q9Y5H5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHA9Q9Y5H5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHA9Q9Y5H5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA9Q9Y5H5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA9Q9Y5H5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA9Q9Y5H5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA9Q9Y5H5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA9Q9Y5H5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PCDHA9Q9Y5H5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.95■■□□□ 1.11
PCDHA9Q9Y5H5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PCDHA9Q9Y5H5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PCDHA9Q9Y5H5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
PCDHA9Q9Y5H5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA9Q9Y5H5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA9Q9Y5H5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA9Q9Y5H5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHA9Q9Y5H5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PCDHA9Q9Y5H5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHA9Q9Y5H5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHA9Q9Y5H5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA9Q9Y5H5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA9Q9Y5H5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA9Q9Y5H5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA9Q9Y5H5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA9Q9Y5H5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
PCDHA9Q9Y5H5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHA9Q9Y5H5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHA9Q9Y5H5 MIR4508-201ENST00000584178 70 ntBASIC21.93■■□□□ 1.1
PCDHA9Q9Y5H5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.93■■□□□ 1.1
PCDHA9Q9Y5H5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms