Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB1Q9Y5G3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHGB1Q9Y5G3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB1Q9Y5G3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB1Q9Y5G3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHGB1Q9Y5G3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB1Q9Y5G3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB1Q9Y5G3 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.9■□□□□ 0.94
PCDHGB1Q9Y5G3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PCDHGB1Q9Y5G3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB1Q9Y5G3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB1Q9Y5G3 AC025884.2-201ENST00000553429 711 ntBASIC20.9■□□□□ 0.94
PCDHGB1Q9Y5G3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PCDHGB1Q9Y5G3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB1Q9Y5G3 ANOS2P-203ENST00000472227 1816 ntBASIC20.9■□□□□ 0.94
PCDHGB1Q9Y5G3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCDHGB1Q9Y5G3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB1Q9Y5G3 AC092068.2-201ENST00000590491 1708 ntBASIC20.9■□□□□ 0.94
PCDHGB1Q9Y5G3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGB1Q9Y5G3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGB1Q9Y5G3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB1Q9Y5G3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB1Q9Y5G3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB1Q9Y5G3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB1Q9Y5G3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB1Q9Y5G3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB1Q9Y5G3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHGB1Q9Y5G3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PCDHGB1Q9Y5G3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB1Q9Y5G3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDHGB1Q9Y5G3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB1Q9Y5G3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
PCDHGB1Q9Y5G3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB1Q9Y5G3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB1Q9Y5G3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB1Q9Y5G3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHGB1Q9Y5G3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB1Q9Y5G3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHGB1Q9Y5G3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB1Q9Y5G3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB1Q9Y5G3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHGB1Q9Y5G3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGB1Q9Y5G3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGB1Q9Y5G3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGB1Q9Y5G3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB1Q9Y5G3 AC007375.3-201ENST00000600936 2314 ntBASIC20.87■□□□□ 0.93
PCDHGB1Q9Y5G3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB1Q9Y5G3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB1Q9Y5G3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB1Q9Y5G3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHGB1Q9Y5G3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB1Q9Y5G3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB1Q9Y5G3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB1Q9Y5G3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHGB1Q9Y5G3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB1Q9Y5G3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB1Q9Y5G3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB1Q9Y5G3 FOXO3B-201ENST00000395675 1928 ntBASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB1Q9Y5G3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGB1Q9Y5G3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGB1Q9Y5G3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGB1Q9Y5G3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHGB1Q9Y5G3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGB1Q9Y5G3 RARRES2P2-201ENST00000394842 485 ntBASIC20.83■□□□□ 0.93
PCDHGB1Q9Y5G3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGB1Q9Y5G3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGB1Q9Y5G3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGB1Q9Y5G3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGB1Q9Y5G3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGB1Q9Y5G3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.83■□□□□ 0.92
PCDHGB1Q9Y5G3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB1Q9Y5G3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms