Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDHB11Q9Y5F2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDHB11Q9Y5F2 AF131216.4-201ENST00000638924 1588 ntBASIC22.39■■□□□ 1.18
PCDHB11Q9Y5F2 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHB11Q9Y5F2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.39■■□□□ 1.17
PCDHB11Q9Y5F2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB11Q9Y5F2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB11Q9Y5F2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
PCDHB11Q9Y5F2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
PCDHB11Q9Y5F2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.38■■□□□ 1.17
PCDHB11Q9Y5F2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHB11Q9Y5F2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHB11Q9Y5F2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHB11Q9Y5F2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PCDHB11Q9Y5F2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB11Q9Y5F2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.37■■□□□ 1.17
PCDHB11Q9Y5F2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHB11Q9Y5F2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PCDHB11Q9Y5F2 LINC01124-201ENST00000409786 2117 ntBASIC22.37■■□□□ 1.17
PCDHB11Q9Y5F2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB11Q9Y5F2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHB11Q9Y5F2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB11Q9Y5F2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.36■■□□□ 1.17
PCDHB11Q9Y5F2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHB11Q9Y5F2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.36■■□□□ 1.17
PCDHB11Q9Y5F2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB11Q9Y5F2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB11Q9Y5F2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHB11Q9Y5F2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB11Q9Y5F2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 AC096631.2-201ENST00000436136 790 ntBASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
PCDHB11Q9Y5F2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB11Q9Y5F2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB11Q9Y5F2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
PCDHB11Q9Y5F2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB11Q9Y5F2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB11Q9Y5F2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB11Q9Y5F2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB11Q9Y5F2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHB11Q9Y5F2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB11Q9Y5F2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 AC005837.3-201ENST00000612163 286 ntBASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB11Q9Y5F2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHB11Q9Y5F2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHB11Q9Y5F2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHB11Q9Y5F2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHB11Q9Y5F2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHB11Q9Y5F2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.33■■□□□ 1.16
PCDHB11Q9Y5F2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.32■■□□□ 1.16
PCDHB11Q9Y5F2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB11Q9Y5F2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB11Q9Y5F2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
PCDHB11Q9Y5F2 AC110285.6-201ENST00000617652 491 ntBASIC22.32■■□□□ 1.16
PCDHB11Q9Y5F2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDHB11Q9Y5F2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB11Q9Y5F2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PCDHB11Q9Y5F2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB11Q9Y5F2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
PCDHB11Q9Y5F2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB11Q9Y5F2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB11Q9Y5F2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
PCDHB11Q9Y5F2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHB11Q9Y5F2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHB11Q9Y5F2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.31■■□□□ 1.16
PCDHB11Q9Y5F2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms