Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC33.24■■■□□ 2.91
STAG3Q9UJ98 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC33.24■■■□□ 2.91
STAG3Q9UJ98 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
STAG3Q9UJ98 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
STAG3Q9UJ98 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
STAG3Q9UJ98 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC33.23■■■□□ 2.91
STAG3Q9UJ98 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC33.23■■■□□ 2.91
STAG3Q9UJ98 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
STAG3Q9UJ98 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
STAG3Q9UJ98 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
STAG3Q9UJ98 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
STAG3Q9UJ98 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC33.22■■■□□ 2.91
STAG3Q9UJ98 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC33.22■■■□□ 2.91
STAG3Q9UJ98 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
STAG3Q9UJ98 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
STAG3Q9UJ98 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC33.21■■■□□ 2.91
STAG3Q9UJ98 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
STAG3Q9UJ98 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC33.21■■■□□ 2.91
STAG3Q9UJ98 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC33.21■■■□□ 2.91
STAG3Q9UJ98 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC33.21■■■□□ 2.91
STAG3Q9UJ98 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
STAG3Q9UJ98 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
STAG3Q9UJ98 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
STAG3Q9UJ98 AC022517.1-201ENST00000592429 346 ntBASIC33.21■■■□□ 2.91
STAG3Q9UJ98 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC33.21■■■□□ 2.91
STAG3Q9UJ98 SHF-206ENST00000560471 2499 ntTSL 5 BASIC33.21■■■□□ 2.91
STAG3Q9UJ98 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
STAG3Q9UJ98 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC33.2■■■□□ 2.91
STAG3Q9UJ98 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC33.2■■■□□ 2.91
STAG3Q9UJ98 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC33.2■■■□□ 2.91
STAG3Q9UJ98 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC33.2■■■□□ 2.9
STAG3Q9UJ98 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
STAG3Q9UJ98 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC33.19■■■□□ 2.9
STAG3Q9UJ98 AC009086.3-201ENST00000623486 1008 ntBASIC33.19■■■□□ 2.9
STAG3Q9UJ98 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC33.19■■■□□ 2.9
STAG3Q9UJ98 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
STAG3Q9UJ98 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC33.18■■■□□ 2.9
STAG3Q9UJ98 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC33.18■■■□□ 2.9
STAG3Q9UJ98 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
STAG3Q9UJ98 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC33.18■■■□□ 2.9
STAG3Q9UJ98 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC33.18■■■□□ 2.9
STAG3Q9UJ98 MIR3181-201ENST00000578512 73 ntBASIC33.18■■■□□ 2.9
STAG3Q9UJ98 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
STAG3Q9UJ98 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC33.17■■■□□ 2.9
STAG3Q9UJ98 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
STAG3Q9UJ98 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC33.17■■■□□ 2.9
STAG3Q9UJ98 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC33.17■■■□□ 2.9
STAG3Q9UJ98 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC33.17■■■□□ 2.9
STAG3Q9UJ98 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC33.17■■■□□ 2.9
STAG3Q9UJ98 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC33.17■■■□□ 2.9
STAG3Q9UJ98 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC33.17■■■□□ 2.9
STAG3Q9UJ98 HACD1-201ENST00000326961 773 ntTSL 2 BASIC33.16■■■□□ 2.9
STAG3Q9UJ98 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
STAG3Q9UJ98 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC33.16■■■□□ 2.9
STAG3Q9UJ98 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC33.16■■■□□ 2.9
STAG3Q9UJ98 AL137784.2-201ENST00000607332 1000 ntBASIC33.16■■■□□ 2.9
STAG3Q9UJ98 AL022069.1-201ENST00000568025 1636 ntBASIC33.16■■■□□ 2.9
STAG3Q9UJ98 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
STAG3Q9UJ98 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC33.15■■■□□ 2.9
STAG3Q9UJ98 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC33.15■■■□□ 2.9
STAG3Q9UJ98 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
STAG3Q9UJ98 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
STAG3Q9UJ98 PKM-203ENST00000389093 2279 ntTSL 5 BASIC33.15■■■□□ 2.9
STAG3Q9UJ98 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC33.15■■■□□ 2.9
STAG3Q9UJ98 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
STAG3Q9UJ98 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
STAG3Q9UJ98 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC33.15■■■□□ 2.9
STAG3Q9UJ98 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC33.14■■■□□ 2.9
STAG3Q9UJ98 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
STAG3Q9UJ98 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC33.14■■■□□ 2.9
STAG3Q9UJ98 KRT18P5-201ENST00000436075 1291 ntBASIC33.13■■■□□ 2.89
STAG3Q9UJ98 AC126544.1-201ENST00000580842 1059 ntBASIC33.13■■■□□ 2.89
STAG3Q9UJ98 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC33.13■■■□□ 2.89
STAG3Q9UJ98 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
STAG3Q9UJ98 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
STAG3Q9UJ98 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
STAG3Q9UJ98 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC33.12■■■□□ 2.89
STAG3Q9UJ98 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
STAG3Q9UJ98 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
STAG3Q9UJ98 YBX1P1-201ENST00000445822 960 ntBASIC33.11■■■□□ 2.89
STAG3Q9UJ98 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC33.11■■■□□ 2.89
STAG3Q9UJ98 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC33.11■■■□□ 2.89
STAG3Q9UJ98 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC33.1■■■□□ 2.89
STAG3Q9UJ98 AL031602.1-201ENST00000633169 911 ntBASIC33.1■■■□□ 2.89
STAG3Q9UJ98 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC33.1■■■□□ 2.89
STAG3Q9UJ98 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
STAG3Q9UJ98 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
STAG3Q9UJ98 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
STAG3Q9UJ98 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC33.09■■■□□ 2.89
STAG3Q9UJ98 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
STAG3Q9UJ98 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC33.09■■■□□ 2.89
STAG3Q9UJ98 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
STAG3Q9UJ98 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
STAG3Q9UJ98 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC33.08■■■□□ 2.89
STAG3Q9UJ98 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
STAG3Q9UJ98 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
STAG3Q9UJ98 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC33.08■■■□□ 2.89
STAG3Q9UJ98 NME4-202ENST00000382940 766 ntTSL 3 BASIC33.08■■■□□ 2.89
STAG3Q9UJ98 NME4-211ENST00000620944 1193 ntTSL 2 BASIC33.08■■■□□ 2.89
STAG3Q9UJ98 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC33.08■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms