Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.84■□□□□ 0.93
MRPL39Q9NYK5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.84■□□□□ 0.93
MRPL39Q9NYK5 PVT1_1.1-201ENST00000615125 194 ntBASIC20.84■□□□□ 0.93
MRPL39Q9NYK5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MRPL39Q9NYK5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MRPL39Q9NYK5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MRPL39Q9NYK5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MRPL39Q9NYK5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.84■□□□□ 0.93
MRPL39Q9NYK5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
MRPL39Q9NYK5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MRPL39Q9NYK5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MRPL39Q9NYK5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.83■□□□□ 0.93
MRPL39Q9NYK5 AL033527.3-201ENST00000566366 1196 ntBASIC20.83■□□□□ 0.93
MRPL39Q9NYK5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.83■□□□□ 0.93
MRPL39Q9NYK5 AC010980.1-201ENST00000587192 1142 ntBASIC20.83■□□□□ 0.93
MRPL39Q9NYK5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MRPL39Q9NYK5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL39Q9NYK5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL39Q9NYK5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.82■□□□□ 0.92
MRPL39Q9NYK5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL39Q9NYK5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRPL39Q9NYK5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
MRPL39Q9NYK5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRPL39Q9NYK5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRPL39Q9NYK5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRPL39Q9NYK5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.81■□□□□ 0.92
MRPL39Q9NYK5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.81■□□□□ 0.92
MRPL39Q9NYK5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRPL39Q9NYK5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
MRPL39Q9NYK5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
MRPL39Q9NYK5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.81■□□□□ 0.92
MRPL39Q9NYK5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPL39Q9NYK5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPL39Q9NYK5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPL39Q9NYK5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
MRPL39Q9NYK5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MRPL39Q9NYK5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.8■□□□□ 0.92
MRPL39Q9NYK5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.8■□□□□ 0.92
MRPL39Q9NYK5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPL39Q9NYK5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.8■□□□□ 0.92
MRPL39Q9NYK5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
MRPL39Q9NYK5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.8■□□□□ 0.92
MRPL39Q9NYK5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
MRPL39Q9NYK5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 AC004812.2-201ENST00000611079 2094 ntBASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
MRPL39Q9NYK5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MRPL39Q9NYK5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 AC120024.1-201ENST00000562672 995 ntBASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPL39Q9NYK5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
MRPL39Q9NYK5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MRPL39Q9NYK5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPL39Q9NYK5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
MRPL39Q9NYK5 KRT18P24-201ENST00000344739 1156 ntBASIC20.76■□□□□ 0.91
MRPL39Q9NYK5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.76■□□□□ 0.91
MRPL39Q9NYK5 MIR4508-201ENST00000584178 70 ntBASIC20.76■□□□□ 0.91
MRPL39Q9NYK5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.76■□□□□ 0.91
MRPL39Q9NYK5 AL161729.1-201ENST00000604104 1402 ntBASIC20.76■□□□□ 0.91
MRPL39Q9NYK5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms