Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
VPS33BQ9H267 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
VPS33BQ9H267 SNX3-202ENST00000349379 890 ntTSL 2 BASIC27.96■■■□□ 2.07
VPS33BQ9H267 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.96■■■□□ 2.07
VPS33BQ9H267 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
VPS33BQ9H267 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
VPS33BQ9H267 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC27.96■■■□□ 2.07
VPS33BQ9H267 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
VPS33BQ9H267 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.96■■■□□ 2.07
VPS33BQ9H267 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.95■■■□□ 2.07
VPS33BQ9H267 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.95■■■□□ 2.06
VPS33BQ9H267 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.95■■■□□ 2.06
VPS33BQ9H267 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC27.94■■■□□ 2.06
VPS33BQ9H267 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
VPS33BQ9H267 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
VPS33BQ9H267 GRAMD4P2-201ENST00000423297 1097 ntBASIC27.94■■■□□ 2.06
VPS33BQ9H267 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC27.94■■■□□ 2.06
VPS33BQ9H267 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
VPS33BQ9H267 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
VPS33BQ9H267 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
VPS33BQ9H267 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.94■■■□□ 2.06
VPS33BQ9H267 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
VPS33BQ9H267 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
VPS33BQ9H267 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
VPS33BQ9H267 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
VPS33BQ9H267 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
VPS33BQ9H267 AC006455.2-201ENST00000429931 906 ntBASIC27.93■■■□□ 2.06
VPS33BQ9H267 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC27.93■■■□□ 2.06
VPS33BQ9H267 AC022517.1-201ENST00000592429 346 ntBASIC27.93■■■□□ 2.06
VPS33BQ9H267 MIR6089-201ENST00000616698 64 ntBASIC27.93■■■□□ 2.06
VPS33BQ9H267 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC27.93■■■□□ 2.06
VPS33BQ9H267 AC009086.3-201ENST00000623486 1008 ntBASIC27.93■■■□□ 2.06
VPS33BQ9H267 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
VPS33BQ9H267 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
VPS33BQ9H267 ASB1-202ENST00000409297 878 ntTSL 5 BASIC27.92■■■□□ 2.06
VPS33BQ9H267 YBX1P1-201ENST00000445822 960 ntBASIC27.92■■■□□ 2.06
VPS33BQ9H267 AC090192.1-201ENST00000517740 490 ntBASIC27.92■■■□□ 2.06
VPS33BQ9H267 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
VPS33BQ9H267 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
VPS33BQ9H267 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.92■■■□□ 2.06
VPS33BQ9H267 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC27.91■■■□□ 2.06
VPS33BQ9H267 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.91■■■□□ 2.06
VPS33BQ9H267 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC27.91■■■□□ 2.06
VPS33BQ9H267 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
VPS33BQ9H267 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.91■■■□□ 2.06
VPS33BQ9H267 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
VPS33BQ9H267 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC27.9■■■□□ 2.06
VPS33BQ9H267 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.9■■■□□ 2.06
VPS33BQ9H267 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
VPS33BQ9H267 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
VPS33BQ9H267 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
VPS33BQ9H267 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
VPS33BQ9H267 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
VPS33BQ9H267 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC27.89■■■□□ 2.06
VPS33BQ9H267 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
VPS33BQ9H267 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
VPS33BQ9H267 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.88■■■□□ 2.05
VPS33BQ9H267 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC27.88■■■□□ 2.05
VPS33BQ9H267 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC27.88■■■□□ 2.05
VPS33BQ9H267 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.88■■■□□ 2.05
VPS33BQ9H267 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
VPS33BQ9H267 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
VPS33BQ9H267 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.88■■■□□ 2.05
VPS33BQ9H267 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
VPS33BQ9H267 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC27.87■■■□□ 2.05
VPS33BQ9H267 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.87■■■□□ 2.05
VPS33BQ9H267 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
VPS33BQ9H267 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
VPS33BQ9H267 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
VPS33BQ9H267 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
VPS33BQ9H267 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.87■■■□□ 2.05
VPS33BQ9H267 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC27.87■■■□□ 2.05
VPS33BQ9H267 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
VPS33BQ9H267 KRT18P5-201ENST00000436075 1291 ntBASIC27.86■■■□□ 2.05
VPS33BQ9H267 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC27.86■■■□□ 2.05
VPS33BQ9H267 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.86■■■□□ 2.05
VPS33BQ9H267 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
VPS33BQ9H267 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
VPS33BQ9H267 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
VPS33BQ9H267 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.85■■■□□ 2.05
VPS33BQ9H267 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
VPS33BQ9H267 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
VPS33BQ9H267 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
VPS33BQ9H267 AL161729.1-201ENST00000604104 1402 ntBASIC27.84■■■□□ 2.05
VPS33BQ9H267 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.84■■■□□ 2.05
VPS33BQ9H267 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
VPS33BQ9H267 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
VPS33BQ9H267 AC123595.1-201ENST00000440769 1046 ntBASIC27.84■■■□□ 2.05
VPS33BQ9H267 SLC47A1P1-202ENST00000449666 945 ntBASIC27.84■■■□□ 2.05
VPS33BQ9H267 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC27.84■■■□□ 2.05
VPS33BQ9H267 AC126544.1-201ENST00000580842 1059 ntBASIC27.84■■■□□ 2.05
VPS33BQ9H267 AL137784.2-201ENST00000607332 1000 ntBASIC27.84■■■□□ 2.05
VPS33BQ9H267 AL358852.1-201ENST00000623174 1268 ntBASIC27.84■■■□□ 2.05
VPS33BQ9H267 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
VPS33BQ9H267 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
VPS33BQ9H267 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
VPS33BQ9H267 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC27.84■■■□□ 2.05
VPS33BQ9H267 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
VPS33BQ9H267 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
VPS33BQ9H267 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27.83■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms