Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
MED28Q9H204 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MED28Q9H204 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MED28Q9H204 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MED28Q9H204 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
MED28Q9H204 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MED28Q9H204 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
MED28Q9H204 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
MED28Q9H204 MIR6089-201ENST00000616698 64 ntBASIC19.5■□□□□ 0.71
MED28Q9H204 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MED28Q9H204 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MED28Q9H204 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MED28Q9H204 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MED28Q9H204 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MED28Q9H204 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MED28Q9H204 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MED28Q9H204 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.49■□□□□ 0.71
MED28Q9H204 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MED28Q9H204 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MED28Q9H204 AC108673.1-201ENST00000510422 1159 ntBASIC19.49■□□□□ 0.71
MED28Q9H204 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.49■□□□□ 0.71
MED28Q9H204 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MED28Q9H204 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MED28Q9H204 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
MED28Q9H204 AL391121.1-201ENST00000607967 1349 ntBASIC19.49■□□□□ 0.71
MED28Q9H204 ANOS2P-203ENST00000472227 1816 ntBASIC19.48■□□□□ 0.71
MED28Q9H204 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MED28Q9H204 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MED28Q9H204 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
MED28Q9H204 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MED28Q9H204 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MED28Q9H204 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MED28Q9H204 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
MED28Q9H204 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MED28Q9H204 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MED28Q9H204 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MED28Q9H204 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
MED28Q9H204 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MED28Q9H204 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MED28Q9H204 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MED28Q9H204 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.47■□□□□ 0.71
MED28Q9H204 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
MED28Q9H204 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.47■□□□□ 0.71
MED28Q9H204 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MED28Q9H204 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MED28Q9H204 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MED28Q9H204 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
MED28Q9H204 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
MED28Q9H204 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
MED28Q9H204 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MED28Q9H204 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MED28Q9H204 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
MED28Q9H204 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.46■□□□□ 0.71
MED28Q9H204 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.46■□□□□ 0.71
MED28Q9H204 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MED28Q9H204 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MED28Q9H204 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.46■□□□□ 0.71
MED28Q9H204 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.7
MED28Q9H204 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MED28Q9H204 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
MED28Q9H204 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.45■□□□□ 0.7
MED28Q9H204 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MED28Q9H204 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
MED28Q9H204 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MED28Q9H204 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MED28Q9H204 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.45■□□□□ 0.7
MED28Q9H204 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.45■□□□□ 0.7
MED28Q9H204 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MED28Q9H204 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.44■□□□□ 0.7
MED28Q9H204 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MED28Q9H204 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.44■□□□□ 0.7
MED28Q9H204 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MED28Q9H204 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MED28Q9H204 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MED28Q9H204 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MED28Q9H204 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MED28Q9H204 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.44■□□□□ 0.7
MED28Q9H204 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.44■□□□□ 0.7
MED28Q9H204 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
MED28Q9H204 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.44■□□□□ 0.7
MED28Q9H204 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.44■□□□□ 0.7
MED28Q9H204 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MED28Q9H204 HLA-L-211ENST00000482052 1765 ntBASIC19.44■□□□□ 0.7
MED28Q9H204 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
MED28Q9H204 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MED28Q9H204 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MED28Q9H204 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.43■□□□□ 0.7
MED28Q9H204 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MED28Q9H204 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MED28Q9H204 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
MED28Q9H204 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MED28Q9H204 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MED28Q9H204 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.43■□□□□ 0.7
MED28Q9H204 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MED28Q9H204 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MED28Q9H204 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MED28Q9H204 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
MED28Q9H204 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MED28Q9H204 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MED28Q9H204 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms