Protein–RNA interactions for Protein: Q96Q42

ALS2, Alsin, humanhuman

Predictions only

Length 1,657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2Q96Q42 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
ALS2Q96Q42 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ALS2Q96Q42 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
ALS2Q96Q42 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC31.28■■■□□ 2.6
ALS2Q96Q42 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC31.27■■■□□ 2.6
ALS2Q96Q42 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
ALS2Q96Q42 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
ALS2Q96Q42 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ALS2Q96Q42 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
ALS2Q96Q42 AK1-201ENST00000223836 736 ntTSL 3 BASIC31.26■■■□□ 2.6
ALS2Q96Q42 AC233992.3-201ENST00000607491 485 ntBASIC31.26■■■□□ 2.6
ALS2Q96Q42 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31.26■■■□□ 2.6
ALS2Q96Q42 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
ALS2Q96Q42 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.26■■■□□ 2.59
ALS2Q96Q42 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.26■■■□□ 2.59
ALS2Q96Q42 AC027612.3-201ENST00000413684 1047 ntBASIC31.25■■■□□ 2.59
ALS2Q96Q42 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC31.25■■■□□ 2.59
ALS2Q96Q42 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ALS2Q96Q42 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ALS2Q96Q42 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
ALS2Q96Q42 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.25■■■□□ 2.59
ALS2Q96Q42 DUX4L2-201ENST00000561772 1275 ntBASIC31.25■■■□□ 2.59
ALS2Q96Q42 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC31.25■■■□□ 2.59
ALS2Q96Q42 DUX4L6-201ENST00000626483 1275 ntBASIC31.25■■■□□ 2.59
ALS2Q96Q42 DUX4L1-201ENST00000627662 1275 ntBASIC31.25■■■□□ 2.59
ALS2Q96Q42 DUX4L8-201ENST00000629013 1275 ntBASIC31.25■■■□□ 2.59
ALS2Q96Q42 DUX4L3-201ENST00000630187 1275 ntBASIC31.25■■■□□ 2.59
ALS2Q96Q42 DUX4L7-201ENST00000630678 1275 ntBASIC31.25■■■□□ 2.59
ALS2Q96Q42 DUX4L5-201ENST00000630834 1275 ntBASIC31.25■■■□□ 2.59
ALS2Q96Q42 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC31.24■■■□□ 2.59
ALS2Q96Q42 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ALS2Q96Q42 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
ALS2Q96Q42 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
ALS2Q96Q42 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ALS2Q96Q42 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
ALS2Q96Q42 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ALS2Q96Q42 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
ALS2Q96Q42 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
ALS2Q96Q42 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
ALS2Q96Q42 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ALS2Q96Q42 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.22■■■□□ 2.59
ALS2Q96Q42 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC31.21■■■□□ 2.59
ALS2Q96Q42 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC31.21■■■□□ 2.59
ALS2Q96Q42 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC31.21■■■□□ 2.59
ALS2Q96Q42 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC31.21■■■□□ 2.59
ALS2Q96Q42 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.21■■■□□ 2.59
ALS2Q96Q42 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ALS2Q96Q42 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
ALS2Q96Q42 YBX1P1-201ENST00000445822 960 ntBASIC31.2■■■□□ 2.59
ALS2Q96Q42 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
ALS2Q96Q42 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.58
ALS2Q96Q42 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.2■■■□□ 2.58
ALS2Q96Q42 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ALS2Q96Q42 SLC47A1P1-202ENST00000449666 945 ntBASIC31.19■■■□□ 2.58
ALS2Q96Q42 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC31.19■■■□□ 2.58
ALS2Q96Q42 AC009086.3-201ENST00000623486 1008 ntBASIC31.19■■■□□ 2.58
ALS2Q96Q42 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC31.19■■■□□ 2.58
ALS2Q96Q42 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ALS2Q96Q42 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ALS2Q96Q42 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
ALS2Q96Q42 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC31.18■■■□□ 2.58
ALS2Q96Q42 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC31.18■■■□□ 2.58
ALS2Q96Q42 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ALS2Q96Q42 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC31.18■■■□□ 2.58
ALS2Q96Q42 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ALS2Q96Q42 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC31.18■■■□□ 2.58
ALS2Q96Q42 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
ALS2Q96Q42 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
ALS2Q96Q42 MIR3181-201ENST00000578512 73 ntBASIC31.17■■■□□ 2.58
ALS2Q96Q42 AC022517.1-201ENST00000592429 346 ntBASIC31.17■■■□□ 2.58
ALS2Q96Q42 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
ALS2Q96Q42 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ALS2Q96Q42 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ALS2Q96Q42 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC31.16■■■□□ 2.58
ALS2Q96Q42 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC31.16■■■□□ 2.58
ALS2Q96Q42 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC31.16■■■□□ 2.58
ALS2Q96Q42 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.16■■■□□ 2.58
ALS2Q96Q42 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
ALS2Q96Q42 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.16■■■□□ 2.58
ALS2Q96Q42 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
ALS2Q96Q42 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC31.16■■■□□ 2.58
ALS2Q96Q42 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ALS2Q96Q42 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
ALS2Q96Q42 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC31.16■■■□□ 2.58
ALS2Q96Q42 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ALS2Q96Q42 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC31.16■■■□□ 2.58
ALS2Q96Q42 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.15■■■□□ 2.58
ALS2Q96Q42 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ALS2Q96Q42 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
ALS2Q96Q42 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ALS2Q96Q42 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ALS2Q96Q42 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
ALS2Q96Q42 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ALS2Q96Q42 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
ALS2Q96Q42 GRAMD4P2-201ENST00000423297 1097 ntBASIC31.14■■■□□ 2.58
ALS2Q96Q42 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC31.14■■■□□ 2.58
ALS2Q96Q42 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC31.14■■■□□ 2.58
ALS2Q96Q42 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC31.14■■■□□ 2.58
ALS2Q96Q42 RAB43-208ENST00000615093 783 ntTSL 5 BASIC31.14■■■□□ 2.58
ALS2Q96Q42 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.14■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms