Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27.14■■□□□ 1.93
NEK1Q96PY6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
NEK1Q96PY6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
NEK1Q96PY6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.13■■□□□ 1.93
NEK1Q96PY6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
NEK1Q96PY6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
NEK1Q96PY6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.13■■□□□ 1.93
NEK1Q96PY6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
NEK1Q96PY6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
NEK1Q96PY6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
NEK1Q96PY6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
NEK1Q96PY6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
NEK1Q96PY6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
NEK1Q96PY6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
NEK1Q96PY6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
NEK1Q96PY6 AC004448.1-201ENST00000458332 883 ntBASIC27.11■■□□□ 1.93
NEK1Q96PY6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.11■■□□□ 1.93
NEK1Q96PY6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.11■■□□□ 1.93
NEK1Q96PY6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
NEK1Q96PY6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
NEK1Q96PY6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
NEK1Q96PY6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
NEK1Q96PY6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
NEK1Q96PY6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC27.1■■□□□ 1.93
NEK1Q96PY6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC27.1■■□□□ 1.93
NEK1Q96PY6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC27.1■■□□□ 1.93
NEK1Q96PY6 ALDH1A3-203ENST00000557963 1670 ntBASIC27.1■■□□□ 1.93
NEK1Q96PY6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
NEK1Q96PY6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
NEK1Q96PY6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
NEK1Q96PY6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
NEK1Q96PY6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC27.09■■□□□ 1.93
NEK1Q96PY6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
NEK1Q96PY6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.09■■□□□ 1.93
NEK1Q96PY6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
NEK1Q96PY6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
NEK1Q96PY6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
NEK1Q96PY6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
NEK1Q96PY6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
NEK1Q96PY6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
NEK1Q96PY6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
NEK1Q96PY6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
NEK1Q96PY6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
NEK1Q96PY6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.07■■□□□ 1.92
NEK1Q96PY6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.07■■□□□ 1.92
NEK1Q96PY6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
NEK1Q96PY6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
NEK1Q96PY6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
NEK1Q96PY6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
NEK1Q96PY6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
NEK1Q96PY6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
NEK1Q96PY6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
NEK1Q96PY6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
NEK1Q96PY6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
NEK1Q96PY6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
NEK1Q96PY6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
NEK1Q96PY6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
NEK1Q96PY6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.06■■□□□ 1.92
NEK1Q96PY6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.06■■□□□ 1.92
NEK1Q96PY6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC27.06■■□□□ 1.92
NEK1Q96PY6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
NEK1Q96PY6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
NEK1Q96PY6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
NEK1Q96PY6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
NEK1Q96PY6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
NEK1Q96PY6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
NEK1Q96PY6 AC021242.3-201ENST00000607598 1377 ntBASIC27.05■■□□□ 1.92
NEK1Q96PY6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
NEK1Q96PY6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
NEK1Q96PY6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
NEK1Q96PY6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.04■■□□□ 1.92
NEK1Q96PY6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
NEK1Q96PY6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.04■■□□□ 1.92
NEK1Q96PY6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.04■■□□□ 1.92
NEK1Q96PY6 SNX5-217ENST00000606557 1087 ntBASIC27.04■■□□□ 1.92
NEK1Q96PY6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
NEK1Q96PY6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC27.04■■□□□ 1.92
NEK1Q96PY6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
NEK1Q96PY6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
NEK1Q96PY6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
NEK1Q96PY6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
NEK1Q96PY6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
NEK1Q96PY6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
NEK1Q96PY6 BX664725.1-201ENST00000438252 379 ntBASIC27.03■■□□□ 1.92
NEK1Q96PY6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC27.03■■□□□ 1.92
NEK1Q96PY6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.03■■□□□ 1.92
NEK1Q96PY6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
NEK1Q96PY6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
NEK1Q96PY6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.03■■□□□ 1.92
NEK1Q96PY6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.03■■□□□ 1.92
NEK1Q96PY6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
NEK1Q96PY6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
NEK1Q96PY6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
NEK1Q96PY6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
NEK1Q96PY6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
NEK1Q96PY6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.02■■□□□ 1.92
NEK1Q96PY6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
NEK1Q96PY6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.02■■□□□ 1.92
NEK1Q96PY6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC27.02■■□□□ 1.92
NEK1Q96PY6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms