Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CALR3Q96L12 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CALR3Q96L12 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CALR3Q96L12 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CALR3Q96L12 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CALR3Q96L12 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CALR3Q96L12 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.18■■□□□ 1.46
CALR3Q96L12 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CALR3Q96L12 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.17■■□□□ 1.46
CALR3Q96L12 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CALR3Q96L12 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CALR3Q96L12 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CALR3Q96L12 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.17■■□□□ 1.46
CALR3Q96L12 AC022616.5-201ENST00000518796 181 ntBASIC24.17■■□□□ 1.46
CALR3Q96L12 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CALR3Q96L12 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.16■■□□□ 1.46
CALR3Q96L12 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CALR3Q96L12 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CALR3Q96L12 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.16■■□□□ 1.46
CALR3Q96L12 AC019171.1-201ENST00000601251 1056 ntBASIC24.16■■□□□ 1.46
CALR3Q96L12 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CALR3Q96L12 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CALR3Q96L12 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CALR3Q96L12 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CALR3Q96L12 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
CALR3Q96L12 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CALR3Q96L12 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.15■■□□□ 1.46
CALR3Q96L12 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CALR3Q96L12 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CALR3Q96L12 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.15■■□□□ 1.46
CALR3Q96L12 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CALR3Q96L12 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CALR3Q96L12 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CALR3Q96L12 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.15■■□□□ 1.46
CALR3Q96L12 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.15■■□□□ 1.46
CALR3Q96L12 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CALR3Q96L12 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.15■■□□□ 1.46
CALR3Q96L12 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CALR3Q96L12 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CALR3Q96L12 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CALR3Q96L12 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.15■■□□□ 1.46
CALR3Q96L12 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.15■■□□□ 1.46
CALR3Q96L12 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
CALR3Q96L12 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CALR3Q96L12 DUSP8P3-201ENST00000399571 1760 ntBASIC24.14■■□□□ 1.46
CALR3Q96L12 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CALR3Q96L12 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CALR3Q96L12 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CALR3Q96L12 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.13■■□□□ 1.45
CALR3Q96L12 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CALR3Q96L12 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CALR3Q96L12 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CALR3Q96L12 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CALR3Q96L12 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CALR3Q96L12 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CALR3Q96L12 RARRES2P2-201ENST00000394842 485 ntBASIC24.12■■□□□ 1.45
CALR3Q96L12 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CALR3Q96L12 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.12■■□□□ 1.45
CALR3Q96L12 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CALR3Q96L12 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CALR3Q96L12 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CALR3Q96L12 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
CALR3Q96L12 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
CALR3Q96L12 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.11■■□□□ 1.45
CALR3Q96L12 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CALR3Q96L12 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CALR3Q96L12 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CALR3Q96L12 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.1■■□□□ 1.45
CALR3Q96L12 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
CALR3Q96L12 AL117328.2-201ENST00000624617 1940 ntBASIC24.1■■□□□ 1.45
CALR3Q96L12 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CALR3Q96L12 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.1■■□□□ 1.45
CALR3Q96L12 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CALR3Q96L12 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CALR3Q96L12 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CALR3Q96L12 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CALR3Q96L12 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.09■■□□□ 1.45
CALR3Q96L12 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.09■■□□□ 1.45
CALR3Q96L12 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CALR3Q96L12 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CALR3Q96L12 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CALR3Q96L12 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.08■■□□□ 1.45
CALR3Q96L12 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CALR3Q96L12 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.08■■□□□ 1.45
CALR3Q96L12 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.08■■□□□ 1.45
CALR3Q96L12 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.08■■□□□ 1.45
CALR3Q96L12 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.08■■□□□ 1.45
CALR3Q96L12 AC129492.7-201ENST00000622992 756 ntBASIC24.08■■□□□ 1.45
CALR3Q96L12 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CALR3Q96L12 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
CALR3Q96L12 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.07■■□□□ 1.44
CALR3Q96L12 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.07■■□□□ 1.44
CALR3Q96L12 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CALR3Q96L12 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.07■■□□□ 1.44
CALR3Q96L12 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.07■■□□□ 1.44
CALR3Q96L12 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.07■■□□□ 1.44
CALR3Q96L12 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CALR3Q96L12 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CALR3Q96L12 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CALR3Q96L12 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms