Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS33AQ96AX1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
VPS33AQ96AX1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS33AQ96AX1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
VPS33AQ96AX1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS33AQ96AX1 ANOS2P-203ENST00000472227 1816 ntBASIC21.92■■□□□ 1.1
VPS33AQ96AX1 AC090877.2-201ENST00000558441 1738 ntBASIC21.92■■□□□ 1.1
VPS33AQ96AX1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS33AQ96AX1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.91■■□□□ 1.1
VPS33AQ96AX1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS33AQ96AX1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS33AQ96AX1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS33AQ96AX1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS33AQ96AX1 RPS2P7-201ENST00000447334 885 ntBASIC21.91■■□□□ 1.1
VPS33AQ96AX1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.91■■□□□ 1.1
VPS33AQ96AX1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS33AQ96AX1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.91■■□□□ 1.1
VPS33AQ96AX1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS33AQ96AX1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS33AQ96AX1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS33AQ96AX1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
VPS33AQ96AX1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS33AQ96AX1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
VPS33AQ96AX1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS33AQ96AX1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS33AQ96AX1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.9■■□□□ 1.1
VPS33AQ96AX1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
VPS33AQ96AX1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
VPS33AQ96AX1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS33AQ96AX1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS33AQ96AX1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS33AQ96AX1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS33AQ96AX1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.89■■□□□ 1.09
VPS33AQ96AX1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS33AQ96AX1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
VPS33AQ96AX1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.89■■□□□ 1.09
VPS33AQ96AX1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
VPS33AQ96AX1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS33AQ96AX1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS33AQ96AX1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS33AQ96AX1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS33AQ96AX1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS33AQ96AX1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
VPS33AQ96AX1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.88■■□□□ 1.09
VPS33AQ96AX1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VPS33AQ96AX1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VPS33AQ96AX1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS33AQ96AX1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VPS33AQ96AX1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.87■■□□□ 1.09
VPS33AQ96AX1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS33AQ96AX1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS33AQ96AX1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VPS33AQ96AX1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS33AQ96AX1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.87■■□□□ 1.09
VPS33AQ96AX1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.87■■□□□ 1.09
VPS33AQ96AX1 SPCS2P3-201ENST00000500401 656 ntBASIC21.87■■□□□ 1.09
VPS33AQ96AX1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.87■■□□□ 1.09
VPS33AQ96AX1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.87■■□□□ 1.09
VPS33AQ96AX1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
VPS33AQ96AX1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
VPS33AQ96AX1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VPS33AQ96AX1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.85■■□□□ 1.09
VPS33AQ96AX1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS33AQ96AX1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VPS33AQ96AX1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VPS33AQ96AX1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.85■■□□□ 1.09
VPS33AQ96AX1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
VPS33AQ96AX1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.84■■□□□ 1.09
VPS33AQ96AX1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
VPS33AQ96AX1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS33AQ96AX1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS33AQ96AX1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS33AQ96AX1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS33AQ96AX1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
VPS33AQ96AX1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS33AQ96AX1 AL592293.1-201ENST00000502889 1188 ntBASIC21.84■■□□□ 1.09
VPS33AQ96AX1 AC018755.3-202ENST00000596210 929 ntBASIC21.84■■□□□ 1.09
VPS33AQ96AX1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
VPS33AQ96AX1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
VPS33AQ96AX1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS33AQ96AX1 AL117328.2-201ENST00000624617 1940 ntBASIC21.84■■□□□ 1.09
VPS33AQ96AX1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.84■■□□□ 1.09
VPS33AQ96AX1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
VPS33AQ96AX1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS33AQ96AX1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS33AQ96AX1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS33AQ96AX1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS33AQ96AX1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms