Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD3L1Q8WWY6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD3L1Q8WWY6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L1Q8WWY6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L1Q8WWY6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L1Q8WWY6 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD3L1Q8WWY6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.96■□□□□ 0.47
MBD3L1Q8WWY6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L1Q8WWY6 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD3L1Q8WWY6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L1Q8WWY6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.96■□□□□ 0.47
MBD3L1Q8WWY6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD3L1Q8WWY6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD3L1Q8WWY6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
MBD3L1Q8WWY6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 AL137060.1-201ENST00000618151 2648 ntBASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 ESRRAP2-201ENST00000418437 1549 ntBASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD3L1Q8WWY6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
MBD3L1Q8WWY6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD3L1Q8WWY6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MBD3L1Q8WWY6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L1Q8WWY6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L1Q8WWY6 AC087741.3-201ENST00000624270 1347 ntBASIC17.94■□□□□ 0.46
MBD3L1Q8WWY6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD3L1Q8WWY6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
MBD3L1Q8WWY6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L1Q8WWY6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L1Q8WWY6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L1Q8WWY6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L1Q8WWY6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L1Q8WWY6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L1Q8WWY6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L1Q8WWY6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L1Q8WWY6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L1Q8WWY6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L1Q8WWY6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L1Q8WWY6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L1Q8WWY6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L1Q8WWY6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD3L1Q8WWY6 SLC25A24-204ENST00000569674 2357 ntBASIC17.91■□□□□ 0.46
MBD3L1Q8WWY6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD3L1Q8WWY6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD3L1Q8WWY6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.9■□□□□ 0.46
MBD3L1Q8WWY6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
MBD3L1Q8WWY6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD3L1Q8WWY6 AP006261.1-201ENST00000584783 668 ntBASIC17.89■□□□□ 0.45
MBD3L1Q8WWY6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MBD3L1Q8WWY6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.89■□□□□ 0.45
MBD3L1Q8WWY6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.89■□□□□ 0.45
MBD3L1Q8WWY6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L1Q8WWY6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
MBD3L1Q8WWY6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms