Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM11BQ8TCY0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SMIM11BQ8TCY0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM11BQ8TCY0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM11BQ8TCY0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
SMIM11BQ8TCY0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM11BQ8TCY0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMIM11BQ8TCY0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM11BQ8TCY0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM11BQ8TCY0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SMIM11BQ8TCY0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM11BQ8TCY0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM11BQ8TCY0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMIM11BQ8TCY0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 AL137060.1-201ENST00000618151 2648 ntBASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SMIM11BQ8TCY0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMIM11BQ8TCY0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
SMIM11BQ8TCY0 AC092068.2-201ENST00000590491 1708 ntBASIC14.83□□□□□ -0.03
SMIM11BQ8TCY0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.83□□□□□ -0.03
SMIM11BQ8TCY0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SMIM11BQ8TCY0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SMIM11BQ8TCY0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMIM11BQ8TCY0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SMIM11BQ8TCY0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMIM11BQ8TCY0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMIM11BQ8TCY0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC14.83□□□□□ -0.04
SMIM11BQ8TCY0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMIM11BQ8TCY0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMIM11BQ8TCY0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11BQ8TCY0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 SLC25A24-204ENST00000569674 2357 ntBASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11BQ8TCY0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 MIR3665-201ENST00000578708 105 ntBASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11BQ8TCY0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms