Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 ALDH1A3-203ENST00000557963 1670 ntBASIC21.27■■□□□ 1
CDRT4Q8N9R6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CDRT4Q8N9R6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CDRT4Q8N9R6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDRT4Q8N9R6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDRT4Q8N9R6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDRT4Q8N9R6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.26■□□□□ 0.99
CDRT4Q8N9R6 RARRES2P1-201ENST00000474487 481 ntBASIC21.26■□□□□ 0.99
CDRT4Q8N9R6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.26■□□□□ 0.99
CDRT4Q8N9R6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.26■□□□□ 0.99
CDRT4Q8N9R6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDRT4Q8N9R6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDRT4Q8N9R6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDRT4Q8N9R6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDRT4Q8N9R6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDRT4Q8N9R6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDRT4Q8N9R6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDRT4Q8N9R6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.25■□□□□ 0.99
CDRT4Q8N9R6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.25■□□□□ 0.99
CDRT4Q8N9R6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.25■□□□□ 0.99
CDRT4Q8N9R6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDRT4Q8N9R6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDRT4Q8N9R6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.24■□□□□ 0.99
CDRT4Q8N9R6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDRT4Q8N9R6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.24■□□□□ 0.99
CDRT4Q8N9R6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDRT4Q8N9R6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.24■□□□□ 0.99
CDRT4Q8N9R6 BX664725.1-201ENST00000438252 379 ntBASIC21.24■□□□□ 0.99
CDRT4Q8N9R6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.24■□□□□ 0.99
CDRT4Q8N9R6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDRT4Q8N9R6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.24■□□□□ 0.99
CDRT4Q8N9R6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.24■□□□□ 0.99
CDRT4Q8N9R6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.23■□□□□ 0.99
CDRT4Q8N9R6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
CDRT4Q8N9R6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDRT4Q8N9R6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDRT4Q8N9R6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.23■□□□□ 0.99
CDRT4Q8N9R6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CDRT4Q8N9R6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDRT4Q8N9R6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT4Q8N9R6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 AC021242.3-201ENST00000607598 1377 ntBASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDRT4Q8N9R6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CDRT4Q8N9R6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDRT4Q8N9R6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CDRT4Q8N9R6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDRT4Q8N9R6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.2■□□□□ 0.98
CDRT4Q8N9R6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.2■□□□□ 0.98
CDRT4Q8N9R6 SNX5-217ENST00000606557 1087 ntBASIC21.2■□□□□ 0.98
CDRT4Q8N9R6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.2■□□□□ 0.98
CDRT4Q8N9R6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDRT4Q8N9R6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDRT4Q8N9R6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDRT4Q8N9R6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT4Q8N9R6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT4Q8N9R6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT4Q8N9R6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT4Q8N9R6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT4Q8N9R6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CDRT4Q8N9R6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT4Q8N9R6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.19■□□□□ 0.98
CDRT4Q8N9R6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT4Q8N9R6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT4Q8N9R6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT4Q8N9R6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.19■□□□□ 0.98
CDRT4Q8N9R6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms