Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNEP1R1Q8N9A8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNEP1R1Q8N9A8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.33■□□□□ 0.85
CNEP1R1Q8N9A8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
CNEP1R1Q8N9A8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNEP1R1Q8N9A8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNEP1R1Q8N9A8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.33■□□□□ 0.85
CNEP1R1Q8N9A8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CNEP1R1Q8N9A8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
CNEP1R1Q8N9A8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNEP1R1Q8N9A8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNEP1R1Q8N9A8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNEP1R1Q8N9A8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNEP1R1Q8N9A8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNEP1R1Q8N9A8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNEP1R1Q8N9A8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNEP1R1Q8N9A8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNEP1R1Q8N9A8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.32■□□□□ 0.84
CNEP1R1Q8N9A8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNEP1R1Q8N9A8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNEP1R1Q8N9A8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNEP1R1Q8N9A8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CNEP1R1Q8N9A8 AC096631.2-201ENST00000436136 790 ntBASIC20.31■□□□□ 0.84
CNEP1R1Q8N9A8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CNEP1R1Q8N9A8 AL139246.5-201ENST00000606645 996 ntBASIC20.31■□□□□ 0.84
CNEP1R1Q8N9A8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNEP1R1Q8N9A8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNEP1R1Q8N9A8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNEP1R1Q8N9A8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNEP1R1Q8N9A8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CNEP1R1Q8N9A8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNEP1R1Q8N9A8 AP003733.4-201ENST00000623785 1697 ntBASIC20.3■□□□□ 0.84
CNEP1R1Q8N9A8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.3■□□□□ 0.84
CNEP1R1Q8N9A8 SRD5A1P1-201ENST00000442297 786 ntBASIC20.3■□□□□ 0.84
CNEP1R1Q8N9A8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNEP1R1Q8N9A8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.29■□□□□ 0.84
CNEP1R1Q8N9A8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNEP1R1Q8N9A8 AC135731.1-201ENST00000569415 2548 ntBASIC20.28■□□□□ 0.84
CNEP1R1Q8N9A8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNEP1R1Q8N9A8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNEP1R1Q8N9A8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNEP1R1Q8N9A8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.28■□□□□ 0.84
CNEP1R1Q8N9A8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.28■□□□□ 0.84
CNEP1R1Q8N9A8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNEP1R1Q8N9A8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNEP1R1Q8N9A8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.28■□□□□ 0.84
CNEP1R1Q8N9A8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNEP1R1Q8N9A8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNEP1R1Q8N9A8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNEP1R1Q8N9A8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNEP1R1Q8N9A8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.27■□□□□ 0.84
CNEP1R1Q8N9A8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.27■□□□□ 0.84
CNEP1R1Q8N9A8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CNEP1R1Q8N9A8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNEP1R1Q8N9A8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CNEP1R1Q8N9A8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.27■□□□□ 0.84
CNEP1R1Q8N9A8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CNEP1R1Q8N9A8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNEP1R1Q8N9A8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 AC110285.6-201ENST00000617652 491 ntBASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 AC142381.3-201ENST00000568208 1670 ntBASIC20.25■□□□□ 0.83
CNEP1R1Q8N9A8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms