Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.95■□□□□ 0.94
LSMEM1Q8N8F7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.95■□□□□ 0.94
LSMEM1Q8N8F7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.95■□□□□ 0.94
LSMEM1Q8N8F7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSMEM1Q8N8F7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
LSMEM1Q8N8F7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSMEM1Q8N8F7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.94■□□□□ 0.94
LSMEM1Q8N8F7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSMEM1Q8N8F7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.94■□□□□ 0.94
LSMEM1Q8N8F7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.94■□□□□ 0.94
LSMEM1Q8N8F7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSMEM1Q8N8F7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSMEM1Q8N8F7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
LSMEM1Q8N8F7 AC079834.2-201ENST00000609776 1949 ntBASIC20.94■□□□□ 0.94
LSMEM1Q8N8F7 AC131274.2-201ENST00000580697 1507 ntBASIC20.94■□□□□ 0.94
LSMEM1Q8N8F7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.93■□□□□ 0.94
LSMEM1Q8N8F7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSMEM1Q8N8F7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LSMEM1Q8N8F7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.93■□□□□ 0.94
LSMEM1Q8N8F7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LSMEM1Q8N8F7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.93■□□□□ 0.94
LSMEM1Q8N8F7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSMEM1Q8N8F7 MIR4508-201ENST00000584178 70 ntBASIC20.93■□□□□ 0.94
LSMEM1Q8N8F7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSMEM1Q8N8F7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.93■□□□□ 0.94
LSMEM1Q8N8F7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LSMEM1Q8N8F7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LSMEM1Q8N8F7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.92■□□□□ 0.94
LSMEM1Q8N8F7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.92■□□□□ 0.94
LSMEM1Q8N8F7 THA1P-201ENST00000590384 1145 ntBASIC20.92■□□□□ 0.94
LSMEM1Q8N8F7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.92■□□□□ 0.94
LSMEM1Q8N8F7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LSMEM1Q8N8F7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSMEM1Q8N8F7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSMEM1Q8N8F7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 AL033527.3-201ENST00000566366 1196 ntBASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.91■□□□□ 0.94
LSMEM1Q8N8F7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSMEM1Q8N8F7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSMEM1Q8N8F7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSMEM1Q8N8F7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.9■□□□□ 0.94
LSMEM1Q8N8F7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.9■□□□□ 0.94
LSMEM1Q8N8F7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.9■□□□□ 0.94
LSMEM1Q8N8F7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSMEM1Q8N8F7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSMEM1Q8N8F7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSMEM1Q8N8F7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSMEM1Q8N8F7 DUSP8P5-201ENST00000422884 1815 ntBASIC20.9■□□□□ 0.94
LSMEM1Q8N8F7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSMEM1Q8N8F7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LSMEM1Q8N8F7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSMEM1Q8N8F7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSMEM1Q8N8F7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSMEM1Q8N8F7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.89■□□□□ 0.93
LSMEM1Q8N8F7 MIR4281-201ENST00000580852 62 ntBASIC20.89■□□□□ 0.93
LSMEM1Q8N8F7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.89■□□□□ 0.93
LSMEM1Q8N8F7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.89■□□□□ 0.93
LSMEM1Q8N8F7 AF131216.4-201ENST00000638924 1588 ntBASIC20.89■□□□□ 0.93
LSMEM1Q8N8F7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.88■□□□□ 0.93
LSMEM1Q8N8F7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.88■□□□□ 0.93
LSMEM1Q8N8F7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.88■□□□□ 0.93
LSMEM1Q8N8F7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LSMEM1Q8N8F7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LSMEM1Q8N8F7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LSMEM1Q8N8F7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LSMEM1Q8N8F7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
LSMEM1Q8N8F7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LSMEM1Q8N8F7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSMEM1Q8N8F7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LSMEM1Q8N8F7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.87■□□□□ 0.93
LSMEM1Q8N8F7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.87■□□□□ 0.93
LSMEM1Q8N8F7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LSMEM1Q8N8F7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSMEM1Q8N8F7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.87■□□□□ 0.93
LSMEM1Q8N8F7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSMEM1Q8N8F7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSMEM1Q8N8F7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSMEM1Q8N8F7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
LSMEM1Q8N8F7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.86■□□□□ 0.93
LSMEM1Q8N8F7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.86■□□□□ 0.93
LSMEM1Q8N8F7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LSMEM1Q8N8F7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LSMEM1Q8N8F7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSMEM1Q8N8F7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms