Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00471Q8N535 AC087393.1-201ENST00000582896 145 ntBASIC20.91■□□□□ 0.94
LINC00471Q8N535 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00471Q8N535 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00471Q8N535 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.9■□□□□ 0.94
LINC00471Q8N535 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00471Q8N535 AL022069.1-201ENST00000568025 1636 ntBASIC20.9■□□□□ 0.94
LINC00471Q8N535 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00471Q8N535 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00471Q8N535 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LINC00471Q8N535 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.9■□□□□ 0.94
LINC00471Q8N535 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LINC00471Q8N535 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LINC00471Q8N535 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00471Q8N535 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00471Q8N535 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00471Q8N535 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
LINC00471Q8N535 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00471Q8N535 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00471Q8N535 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LINC00471Q8N535 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00471Q8N535 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00471Q8N535 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.89■□□□□ 0.93
LINC00471Q8N535 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00471Q8N535 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00471Q8N535 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00471Q8N535 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00471Q8N535 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00471Q8N535 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00471Q8N535 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00471Q8N535 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.88■□□□□ 0.93
LINC00471Q8N535 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00471Q8N535 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00471Q8N535 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00471Q8N535 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00471Q8N535 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00471Q8N535 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00471Q8N535 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LINC00471Q8N535 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LINC00471Q8N535 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.88■□□□□ 0.93
LINC00471Q8N535 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00471Q8N535 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LINC00471Q8N535 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LINC00471Q8N535 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00471Q8N535 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00471Q8N535 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.87■□□□□ 0.93
LINC00471Q8N535 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.87■□□□□ 0.93
LINC00471Q8N535 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00471Q8N535 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00471Q8N535 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00471Q8N535 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00471Q8N535 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.87■□□□□ 0.93
LINC00471Q8N535 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00471Q8N535 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00471Q8N535 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00471Q8N535 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.87■□□□□ 0.93
LINC00471Q8N535 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00471Q8N535 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00471Q8N535 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00471Q8N535 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00471Q8N535 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00471Q8N535 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00471Q8N535 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00471Q8N535 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LINC00471Q8N535 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00471Q8N535 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.85■□□□□ 0.93
LINC00471Q8N535 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00471Q8N535 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00471Q8N535 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.85■□□□□ 0.93
LINC00471Q8N535 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00471Q8N535 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00471Q8N535 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00471Q8N535 RNF126P1-201ENST00000567452 1320 ntBASIC20.85■□□□□ 0.93
LINC00471Q8N535 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00471Q8N535 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00471Q8N535 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LINC00471Q8N535 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00471Q8N535 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.85■□□□□ 0.93
LINC00471Q8N535 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00471Q8N535 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.84■□□□□ 0.93
LINC00471Q8N535 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00471Q8N535 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.84■□□□□ 0.93
LINC00471Q8N535 AC233723.2-201ENST00000623798 2106 ntBASIC20.84■□□□□ 0.93
LINC00471Q8N535 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00471Q8N535 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.84■□□□□ 0.93
LINC00471Q8N535 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00471Q8N535 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00471Q8N535 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LINC00471Q8N535 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00471Q8N535 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00471Q8N535 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.83■□□□□ 0.93
LINC00471Q8N535 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.83■□□□□ 0.93
LINC00471Q8N535 MIR6765-201ENST00000614092 87 ntBASIC20.83■□□□□ 0.93
LINC00471Q8N535 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00471Q8N535 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00471Q8N535 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00471Q8N535 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00471Q8N535 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00471Q8N535 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00471Q8N535 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms