Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MIR3621-201ENST00000580529 85 ntBASIC22.53■■□□□ 1.2
LRRTM4Q86VH4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.53■■□□□ 1.2
LRRTM4Q86VH4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRRTM4Q86VH4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
LRRTM4Q86VH4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRTM4Q86VH4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.52■■□□□ 1.2
LRRTM4Q86VH4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.52■■□□□ 1.2
LRRTM4Q86VH4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
LRRTM4Q86VH4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.51■■□□□ 1.19
LRRTM4Q86VH4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.51■■□□□ 1.19
LRRTM4Q86VH4 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.51■■□□□ 1.19
LRRTM4Q86VH4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.51■■□□□ 1.19
LRRTM4Q86VH4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRTM4Q86VH4 AL139125.2-201ENST00000623134 1869 ntBASIC22.51■■□□□ 1.19
LRRTM4Q86VH4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRTM4Q86VH4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM4Q86VH4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
LRRTM4Q86VH4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
LRRTM4Q86VH4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
LRRTM4Q86VH4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.5■■□□□ 1.19
LRRTM4Q86VH4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.5■■□□□ 1.19
LRRTM4Q86VH4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.5■■□□□ 1.19
LRRTM4Q86VH4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.5■■□□□ 1.19
LRRTM4Q86VH4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM4Q86VH4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM4Q86VH4 AC141586.4-201ENST00000624558 1573 ntBASIC22.5■■□□□ 1.19
LRRTM4Q86VH4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM4Q86VH4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 LINC01124-201ENST00000409786 2117 ntBASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM4Q86VH4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRTM4Q86VH4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LRRTM4Q86VH4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRTM4Q86VH4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRTM4Q86VH4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.48■■□□□ 1.19
LRRTM4Q86VH4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
LRRTM4Q86VH4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRTM4Q86VH4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRTM4Q86VH4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.48■■□□□ 1.19
LRRTM4Q86VH4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
LRRTM4Q86VH4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
LRRTM4Q86VH4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.47■■□□□ 1.19
LRRTM4Q86VH4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRRTM4Q86VH4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.47■■□□□ 1.19
LRRTM4Q86VH4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.47■■□□□ 1.19
LRRTM4Q86VH4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.47■■□□□ 1.19
LRRTM4Q86VH4 LINC00543-201ENST00000567234 1845 ntBASIC22.47■■□□□ 1.19
LRRTM4Q86VH4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRTM4Q86VH4 ALDH1A3-203ENST00000557963 1670 ntBASIC22.46■■□□□ 1.19
LRRTM4Q86VH4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.46■■□□□ 1.19
LRRTM4Q86VH4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
LRRTM4Q86VH4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRTM4Q86VH4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRTM4Q86VH4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRTM4Q86VH4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRTM4Q86VH4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.46■■□□□ 1.19
LRRTM4Q86VH4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
LRRTM4Q86VH4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
LRRTM4Q86VH4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
LRRTM4Q86VH4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.45■■□□□ 1.19
LRRTM4Q86VH4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.45■■□□□ 1.18
LRRTM4Q86VH4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LRRTM4Q86VH4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LRRTM4Q86VH4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
LRRTM4Q86VH4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LRRTM4Q86VH4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
LRRTM4Q86VH4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.45■■□□□ 1.18
LRRTM4Q86VH4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRTM4Q86VH4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
LRRTM4Q86VH4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRTM4Q86VH4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
LRRTM4Q86VH4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LRRTM4Q86VH4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.44■■□□□ 1.18
LRRTM4Q86VH4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.44■■□□□ 1.18
LRRTM4Q86VH4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRTM4Q86VH4 AC008406.3-201ENST00000620001 1374 ntBASIC22.44■■□□□ 1.18
LRRTM4Q86VH4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRTM4Q86VH4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
LRRTM4Q86VH4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRTM4Q86VH4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.43■■□□□ 1.18
LRRTM4Q86VH4 AC131281.2-201ENST00000520478 145 ntBASIC22.43■■□□□ 1.18
LRRTM4Q86VH4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.43■■□□□ 1.18
LRRTM4Q86VH4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.43■■□□□ 1.18
LRRTM4Q86VH4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM4Q86VH4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM4Q86VH4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.42■■□□□ 1.18
LRRTM4Q86VH4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM4Q86VH4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM4Q86VH4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms