Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHFQ7M4L6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHFQ7M4L6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHFQ7M4L6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHFQ7M4L6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SHFQ7M4L6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SHFQ7M4L6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHFQ7M4L6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHFQ7M4L6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHFQ7M4L6 AL117328.2-201ENST00000624617 1940 ntBASIC20.6■□□□□ 0.89
SHFQ7M4L6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHFQ7M4L6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHFQ7M4L6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SHFQ7M4L6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHFQ7M4L6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHFQ7M4L6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHFQ7M4L6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHFQ7M4L6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHFQ7M4L6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SHFQ7M4L6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHFQ7M4L6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SHFQ7M4L6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SHFQ7M4L6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHFQ7M4L6 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.59■□□□□ 0.89
SHFQ7M4L6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHFQ7M4L6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SHFQ7M4L6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHFQ7M4L6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SHFQ7M4L6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHFQ7M4L6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHFQ7M4L6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHFQ7M4L6 AC233723.2-201ENST00000623798 2106 ntBASIC20.59■□□□□ 0.89
SHFQ7M4L6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.59■□□□□ 0.89
SHFQ7M4L6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHFQ7M4L6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHFQ7M4L6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SHFQ7M4L6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.58■□□□□ 0.89
SHFQ7M4L6 ANOS2P-203ENST00000472227 1816 ntBASIC20.58■□□□□ 0.89
SHFQ7M4L6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHFQ7M4L6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.58■□□□□ 0.88
SHFQ7M4L6 EP400NL-214ENST00000641289 2402 ntBASIC20.58■□□□□ 0.88
SHFQ7M4L6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHFQ7M4L6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.58■□□□□ 0.88
SHFQ7M4L6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHFQ7M4L6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHFQ7M4L6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHFQ7M4L6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHFQ7M4L6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.57■□□□□ 0.88
SHFQ7M4L6 AC018755.3-202ENST00000596210 929 ntBASIC20.57■□□□□ 0.88
SHFQ7M4L6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SHFQ7M4L6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.57■□□□□ 0.88
SHFQ7M4L6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHFQ7M4L6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHFQ7M4L6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHFQ7M4L6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHFQ7M4L6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.56■□□□□ 0.88
SHFQ7M4L6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHFQ7M4L6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHFQ7M4L6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHFQ7M4L6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHFQ7M4L6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHFQ7M4L6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHFQ7M4L6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.55■□□□□ 0.88
SHFQ7M4L6 RPS2P7-201ENST00000447334 885 ntBASIC20.55■□□□□ 0.88
SHFQ7M4L6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SHFQ7M4L6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SHFQ7M4L6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHFQ7M4L6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHFQ7M4L6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHFQ7M4L6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHFQ7M4L6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHFQ7M4L6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.54■□□□□ 0.88
SHFQ7M4L6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHFQ7M4L6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.54■□□□□ 0.88
SHFQ7M4L6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.54■□□□□ 0.88
SHFQ7M4L6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHFQ7M4L6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHFQ7M4L6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHFQ7M4L6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.54■□□□□ 0.88
SHFQ7M4L6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.54■□□□□ 0.88
SHFQ7M4L6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHFQ7M4L6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.54■□□□□ 0.88
SHFQ7M4L6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SHFQ7M4L6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
SHFQ7M4L6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHFQ7M4L6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHFQ7M4L6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.53■□□□□ 0.88
SHFQ7M4L6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.53■□□□□ 0.88
SHFQ7M4L6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SHFQ7M4L6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHFQ7M4L6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHFQ7M4L6 C1orf229-201ENST00000623686 2258 ntBASIC20.53■□□□□ 0.88
SHFQ7M4L6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHFQ7M4L6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SHFQ7M4L6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHFQ7M4L6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.52■□□□□ 0.88
SHFQ7M4L6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHFQ7M4L6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHFQ7M4L6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHFQ7M4L6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms