Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AC131212.1-201ENST00000613771 668 ntBASIC20.91■□□□□ 0.94
CHMP1BQ7LBR1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHMP1BQ7LBR1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP1BQ7LBR1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CHMP1BQ7LBR1 SLC6A10P-202ENST00000431994 2058 ntBASIC20.9■□□□□ 0.94
CHMP1BQ7LBR1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP1BQ7LBR1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP1BQ7LBR1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.9■□□□□ 0.94
CHMP1BQ7LBR1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP1BQ7LBR1 KRT16P3-201ENST00000439127 1283 ntBASIC20.9■□□□□ 0.94
CHMP1BQ7LBR1 AL356441.2-201ENST00000443009 864 ntBASIC20.9■□□□□ 0.94
CHMP1BQ7LBR1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.9■□□□□ 0.94
CHMP1BQ7LBR1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP1BQ7LBR1 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.9■□□□□ 0.94
CHMP1BQ7LBR1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP1BQ7LBR1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.89■□□□□ 0.94
CHMP1BQ7LBR1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP1BQ7LBR1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CHMP1BQ7LBR1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP1BQ7LBR1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.89■□□□□ 0.93
CHMP1BQ7LBR1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP1BQ7LBR1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP1BQ7LBR1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP1BQ7LBR1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHMP1BQ7LBR1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP1BQ7LBR1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP1BQ7LBR1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CHMP1BQ7LBR1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP1BQ7LBR1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP1BQ7LBR1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.88■□□□□ 0.93
CHMP1BQ7LBR1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CHMP1BQ7LBR1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP1BQ7LBR1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP1BQ7LBR1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP1BQ7LBR1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP1BQ7LBR1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMP1BQ7LBR1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
CHMP1BQ7LBR1 MTDHP2-201ENST00000601468 714 ntBASIC20.87■□□□□ 0.93
CHMP1BQ7LBR1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP1BQ7LBR1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP1BQ7LBR1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 UNC93B8-201ENST00000511903 705 ntBASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP1BQ7LBR1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 AC010997.5-201ENST00000609182 354 ntBASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 AF131216.4-201ENST00000638924 1588 ntBASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP1BQ7LBR1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.83■□□□□ 0.93
CHMP1BQ7LBR1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP1BQ7LBR1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP1BQ7LBR1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP1BQ7LBR1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CHMP1BQ7LBR1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP1BQ7LBR1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
CHMP1BQ7LBR1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.83■□□□□ 0.92
CHMP1BQ7LBR1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CHMP1BQ7LBR1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP1BQ7LBR1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP1BQ7LBR1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP1BQ7LBR1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP1BQ7LBR1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP1BQ7LBR1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP1BQ7LBR1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP1BQ7LBR1 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms