Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NHLRC1Q6VVB1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NHLRC1Q6VVB1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.54■□□□□ 0.88
NHLRC1Q6VVB1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NHLRC1Q6VVB1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NHLRC1Q6VVB1 AC012676.1-201ENST00000574705 1949 ntBASIC20.53■□□□□ 0.88
NHLRC1Q6VVB1 YBX1P4-201ENST00000392794 808 ntBASIC20.53■□□□□ 0.88
NHLRC1Q6VVB1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NHLRC1Q6VVB1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NHLRC1Q6VVB1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NHLRC1Q6VVB1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NHLRC1Q6VVB1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.52■□□□□ 0.88
NHLRC1Q6VVB1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NHLRC1Q6VVB1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
NHLRC1Q6VVB1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NHLRC1Q6VVB1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NHLRC1Q6VVB1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NHLRC1Q6VVB1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.51■□□□□ 0.87
NHLRC1Q6VVB1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
NHLRC1Q6VVB1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NHLRC1Q6VVB1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.51■□□□□ 0.87
NHLRC1Q6VVB1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NHLRC1Q6VVB1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NHLRC1Q6VVB1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NHLRC1Q6VVB1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NHLRC1Q6VVB1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.5■□□□□ 0.87
NHLRC1Q6VVB1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.5■□□□□ 0.87
NHLRC1Q6VVB1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.5■□□□□ 0.87
NHLRC1Q6VVB1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NHLRC1Q6VVB1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NHLRC1Q6VVB1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NHLRC1Q6VVB1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NHLRC1Q6VVB1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NHLRC1Q6VVB1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.49■□□□□ 0.87
NHLRC1Q6VVB1 AC137630.3-201ENST00000607245 391 ntBASIC20.49■□□□□ 0.87
NHLRC1Q6VVB1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NHLRC1Q6VVB1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NHLRC1Q6VVB1 ABCB10P4-201ENST00000566803 2184 ntBASIC20.49■□□□□ 0.87
NHLRC1Q6VVB1 AL022069.1-201ENST00000568025 1636 ntBASIC20.49■□□□□ 0.87
NHLRC1Q6VVB1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.49■□□□□ 0.87
NHLRC1Q6VVB1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NHLRC1Q6VVB1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NHLRC1Q6VVB1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.48■□□□□ 0.87
NHLRC1Q6VVB1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NHLRC1Q6VVB1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NHLRC1Q6VVB1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 RARRES2P1-201ENST00000474487 481 ntBASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 AL031848.2-201ENST00000607670 837 ntBASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NHLRC1Q6VVB1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NHLRC1Q6VVB1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NHLRC1Q6VVB1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NHLRC1Q6VVB1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.46■□□□□ 0.87
NHLRC1Q6VVB1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NHLRC1Q6VVB1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NHLRC1Q6VVB1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NHLRC1Q6VVB1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NHLRC1Q6VVB1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.46■□□□□ 0.87
NHLRC1Q6VVB1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.46■□□□□ 0.87
NHLRC1Q6VVB1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NHLRC1Q6VVB1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NHLRC1Q6VVB1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
NHLRC1Q6VVB1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.45■□□□□ 0.86
NHLRC1Q6VVB1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.45■□□□□ 0.86
NHLRC1Q6VVB1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.45■□□□□ 0.86
NHLRC1Q6VVB1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.45■□□□□ 0.86
NHLRC1Q6VVB1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NHLRC1Q6VVB1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NHLRC1Q6VVB1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NHLRC1Q6VVB1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NHLRC1Q6VVB1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NHLRC1Q6VVB1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.44■□□□□ 0.86
NHLRC1Q6VVB1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
NHLRC1Q6VVB1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NHLRC1Q6VVB1 AC068473.5-201ENST00000616428 2072 ntBASIC20.44■□□□□ 0.86
NHLRC1Q6VVB1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NHLRC1Q6VVB1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NHLRC1Q6VVB1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.43■□□□□ 0.86
NHLRC1Q6VVB1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.43■□□□□ 0.86
NHLRC1Q6VVB1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NHLRC1Q6VVB1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.43■□□□□ 0.86
NHLRC1Q6VVB1 AC004448.1-201ENST00000458332 883 ntBASIC20.43■□□□□ 0.86
NHLRC1Q6VVB1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NHLRC1Q6VVB1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NHLRC1Q6VVB1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms