Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
USH1GQ495M9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.42■■□□□ 1.82
USH1GQ495M9 AC142381.3-201ENST00000568208 1670 ntBASIC26.41■■□□□ 1.82
USH1GQ495M9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
USH1GQ495M9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
USH1GQ495M9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
USH1GQ495M9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
USH1GQ495M9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
USH1GQ495M9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
USH1GQ495M9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
USH1GQ495M9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
USH1GQ495M9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
USH1GQ495M9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.4■■□□□ 1.82
USH1GQ495M9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
USH1GQ495M9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.4■■□□□ 1.82
USH1GQ495M9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
USH1GQ495M9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
USH1GQ495M9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
USH1GQ495M9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
USH1GQ495M9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
USH1GQ495M9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
USH1GQ495M9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
USH1GQ495M9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.38■■□□□ 1.81
USH1GQ495M9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.38■■□□□ 1.81
USH1GQ495M9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.37■■□□□ 1.81
USH1GQ495M9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USH1GQ495M9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
USH1GQ495M9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.37■■□□□ 1.81
USH1GQ495M9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
USH1GQ495M9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.37■■□□□ 1.81
USH1GQ495M9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.37■■□□□ 1.81
USH1GQ495M9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
USH1GQ495M9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.37■■□□□ 1.81
USH1GQ495M9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USH1GQ495M9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USH1GQ495M9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
USH1GQ495M9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.36■■□□□ 1.81
USH1GQ495M9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
USH1GQ495M9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
USH1GQ495M9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USH1GQ495M9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
USH1GQ495M9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
USH1GQ495M9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
USH1GQ495M9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USH1GQ495M9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
USH1GQ495M9 AC096631.2-201ENST00000436136 790 ntBASIC26.35■■□□□ 1.81
USH1GQ495M9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
USH1GQ495M9 AC019069.1-201ENST00000610008 1333 ntBASIC26.35■■□□□ 1.81
USH1GQ495M9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
USH1GQ495M9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.34■■□□□ 1.81
USH1GQ495M9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.34■■□□□ 1.81
USH1GQ495M9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
USH1GQ495M9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
USH1GQ495M9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
USH1GQ495M9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
USH1GQ495M9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
USH1GQ495M9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
USH1GQ495M9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.33■■□□□ 1.81
USH1GQ495M9 AL139246.5-201ENST00000606645 996 ntBASIC26.33■■□□□ 1.81
USH1GQ495M9 AC110285.6-201ENST00000617652 491 ntBASIC26.33■■□□□ 1.81
USH1GQ495M9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
USH1GQ495M9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
USH1GQ495M9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.32■■□□□ 1.8
USH1GQ495M9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USH1GQ495M9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USH1GQ495M9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.32■■□□□ 1.8
USH1GQ495M9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
USH1GQ495M9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USH1GQ495M9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
USH1GQ495M9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.31■■□□□ 1.8
USH1GQ495M9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USH1GQ495M9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USH1GQ495M9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USH1GQ495M9 SRD5A1P1-201ENST00000442297 786 ntBASIC26.3■■□□□ 1.8
USH1GQ495M9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USH1GQ495M9 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.3■■□□□ 1.8
USH1GQ495M9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
USH1GQ495M9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
USH1GQ495M9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.3■■□□□ 1.8
USH1GQ495M9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.3■■□□□ 1.8
USH1GQ495M9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
USH1GQ495M9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
USH1GQ495M9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
USH1GQ495M9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
USH1GQ495M9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
USH1GQ495M9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
USH1GQ495M9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
USH1GQ495M9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
USH1GQ495M9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USH1GQ495M9 MIR638-201ENST00000385237 100 ntBASIC26.28■■□□□ 1.8
USH1GQ495M9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.28■■□□□ 1.8
USH1GQ495M9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.28■■□□□ 1.8
USH1GQ495M9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USH1GQ495M9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
USH1GQ495M9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
USH1GQ495M9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
USH1GQ495M9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.27■■□□□ 1.8
USH1GQ495M9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.27■■□□□ 1.8
USH1GQ495M9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
USH1GQ495M9 AL161729.1-201ENST00000604104 1402 ntBASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms