Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST1H1AQ02539 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H1AQ02539 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.37■□□□□ 0.37
HIST1H1AQ02539 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.37■□□□□ 0.37
HIST1H1AQ02539 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST1H1AQ02539 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 AC087393.1-201ENST00000582896 145 ntBASIC17.36■□□□□ 0.37
HIST1H1AQ02539 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 AC004812.2-201ENST00000611079 2094 ntBASIC17.36■□□□□ 0.37
HIST1H1AQ02539 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H1AQ02539 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.35■□□□□ 0.37
HIST1H1AQ02539 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 AL024507.2-201ENST00000606070 2574 ntBASIC17.35■□□□□ 0.37
HIST1H1AQ02539 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H1AQ02539 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1AQ02539 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1AQ02539 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1AQ02539 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1AQ02539 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST1H1AQ02539 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1AQ02539 AL592295.1-201ENST00000400984 884 ntBASIC17.34■□□□□ 0.37
HIST1H1AQ02539 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1AQ02539 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HIST1H1AQ02539 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST1H1AQ02539 AC129492.7-201ENST00000622992 756 ntBASIC17.34■□□□□ 0.37
HIST1H1AQ02539 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HIST1H1AQ02539 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
HIST1H1AQ02539 ABCB10P4-201ENST00000566803 2184 ntBASIC17.33■□□□□ 0.36
HIST1H1AQ02539 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.33■□□□□ 0.36
HIST1H1AQ02539 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H1AQ02539 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1AQ02539 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1AQ02539 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
HIST1H1AQ02539 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1AQ02539 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1AQ02539 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H1AQ02539 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.32■□□□□ 0.36
HIST1H1AQ02539 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1AQ02539 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HIST1H1AQ02539 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1AQ02539 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1AQ02539 PKD1P6-201ENST00000343738 4769 ntBASIC17.32■□□□□ 0.36
HIST1H1AQ02539 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 KRT18P60-201ENST00000312876 1297 ntBASIC17.31■□□□□ 0.36
HIST1H1AQ02539 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 ABHD17AP5-201ENST00000580133 923 ntBASIC17.31■□□□□ 0.36
HIST1H1AQ02539 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H1AQ02539 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1AQ02539 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1AQ02539 AC090877.2-201ENST00000558441 1738 ntBASIC17.3■□□□□ 0.36
HIST1H1AQ02539 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
HIST1H1AQ02539 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.3■□□□□ 0.36
HIST1H1AQ02539 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1AQ02539 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HIST1H1AQ02539 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1AQ02539 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1AQ02539 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1AQ02539 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.3■□□□□ 0.36
HIST1H1AQ02539 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms