Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
CLDN12P56749 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN12P56749 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.83■□□□□ 0.77
CLDN12P56749 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN12P56749 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN12P56749 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.83■□□□□ 0.76
CLDN12P56749 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN12P56749 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN12P56749 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN12P56749 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN12P56749 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CLDN12P56749 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN12P56749 ECEL1P2-201ENST00000461596 1295 ntBASIC19.82■□□□□ 0.76
CLDN12P56749 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN12P56749 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN12P56749 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN12P56749 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN12P56749 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN12P56749 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN12P56749 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN12P56749 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN12P56749 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN12P56749 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN12P56749 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN12P56749 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN12P56749 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CLDN12P56749 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN12P56749 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN12P56749 DUSP8P3-201ENST00000399571 1760 ntBASIC19.81■□□□□ 0.76
CLDN12P56749 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN12P56749 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN12P56749 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN12P56749 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN12P56749 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN12P56749 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN12P56749 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN12P56749 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN12P56749 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN12P56749 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN12P56749 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN12P56749 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN12P56749 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN12P56749 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN12P56749 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN12P56749 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN12P56749 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLDN12P56749 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN12P56749 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN12P56749 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CLDN12P56749 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
CLDN12P56749 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.79■□□□□ 0.76
CLDN12P56749 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLDN12P56749 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN12P56749 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN12P56749 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN12P56749 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN12P56749 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN12P56749 AC092068.2-201ENST00000590491 1708 ntBASIC19.79■□□□□ 0.76
CLDN12P56749 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN12P56749 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN12P56749 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN12P56749 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN12P56749 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN12P56749 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN12P56749 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CLDN12P56749 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CLDN12P56749 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN12P56749 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN12P56749 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.78■□□□□ 0.76
CLDN12P56749 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN12P56749 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN12P56749 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN12P56749 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLDN12P56749 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN12P56749 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLDN12P56749 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN12P56749 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN12P56749 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLDN12P56749 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CLDN12P56749 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN12P56749 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN12P56749 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN12P56749 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN12P56749 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLDN12P56749 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms