Protein–RNA interactions for Protein: P18754

RCC1, Regulator of chromosome condensation, humanhuman

Predicted RBP Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1P18754 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RCC1P18754 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
RCC1P18754 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCC1P18754 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCC1P18754 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.25■□□□□ 0.67
RCC1P18754 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCC1P18754 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCC1P18754 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RCC1P18754 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.25■□□□□ 0.67
RCC1P18754 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCC1P18754 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RCC1P18754 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
RCC1P18754 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCC1P18754 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCC1P18754 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RCC1P18754 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCC1P18754 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.24■□□□□ 0.67
RCC1P18754 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.24■□□□□ 0.67
RCC1P18754 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RCC1P18754 LONRF2P2-201ENST00000439212 571 ntBASIC19.24■□□□□ 0.67
RCC1P18754 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.24■□□□□ 0.67
RCC1P18754 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCC1P18754 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.24■□□□□ 0.67
RCC1P18754 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RCC1P18754 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RCC1P18754 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCC1P18754 AL024507.2-201ENST00000606070 2574 ntBASIC19.23■□□□□ 0.67
RCC1P18754 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RCC1P18754 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCC1P18754 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RCC1P18754 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.23■□□□□ 0.67
RCC1P18754 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCC1P18754 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RCC1P18754 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCC1P18754 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RCC1P18754 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.22■□□□□ 0.67
RCC1P18754 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCC1P18754 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCC1P18754 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCC1P18754 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RCC1P18754 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RCC1P18754 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RCC1P18754 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCC1P18754 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RCC1P18754 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCC1P18754 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.21■□□□□ 0.67
RCC1P18754 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCC1P18754 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.2■□□□□ 0.66
RCC1P18754 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCC1P18754 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RCC1P18754 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCC1P18754 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCC1P18754 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.2■□□□□ 0.66
RCC1P18754 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCC1P18754 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.2■□□□□ 0.66
RCC1P18754 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.2■□□□□ 0.66
RCC1P18754 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCC1P18754 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCC1P18754 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RCC1P18754 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RCC1P18754 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCC1P18754 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.19■□□□□ 0.66
RCC1P18754 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCC1P18754 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCC1P18754 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCC1P18754 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RCC1P18754 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RCC1P18754 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCC1P18754 ABHD17AP5-201ENST00000580133 923 ntBASIC19.19■□□□□ 0.66
RCC1P18754 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCC1P18754 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCC1P18754 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RCC1P18754 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCC1P18754 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RCC1P18754 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RCC1P18754 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCC1P18754 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCC1P18754 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.18■□□□□ 0.66
RCC1P18754 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.18■□□□□ 0.66
RCC1P18754 DUX4L18-201ENST00000553347 1267 ntBASIC19.18■□□□□ 0.66
RCC1P18754 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RCC1P18754 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.18■□□□□ 0.66
RCC1P18754 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RCC1P18754 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCC1P18754 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCC1P18754 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RCC1P18754 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RCC1P18754 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RCC1P18754 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RCC1P18754 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RCC1P18754 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCC1P18754 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCC1P18754 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RCC1P18754 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.17■□□□□ 0.66
RCC1P18754 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.17■□□□□ 0.66
RCC1P18754 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.17■□□□□ 0.66
RCC1P18754 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCC1P18754 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.17■□□□□ 0.66
RCC1P18754 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RCC1P18754 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms