Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SNRPA1P09661 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
SNRPA1P09661 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC29.44■■■□□ 2.3
SNRPA1P09661 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SNRPA1P09661 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.44■■■□□ 2.3
SNRPA1P09661 AL161729.1-201ENST00000604104 1402 ntBASIC29.44■■■□□ 2.3
SNRPA1P09661 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC29.44■■■□□ 2.3
SNRPA1P09661 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SNRPA1P09661 SYT6-210ENST00000641643 1587 ntBASIC29.43■■■□□ 2.3
SNRPA1P09661 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
SNRPA1P09661 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SNRPA1P09661 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29.43■■■□□ 2.3
SNRPA1P09661 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC29.43■■■□□ 2.3
SNRPA1P09661 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNRPA1P09661 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SNRPA1P09661 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SNRPA1P09661 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNRPA1P09661 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SNRPA1P09661 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
SNRPA1P09661 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC29.42■■■□□ 2.3
SNRPA1P09661 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC29.42■■■□□ 2.3
SNRPA1P09661 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SNRPA1P09661 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC29.42■■■□□ 2.3
SNRPA1P09661 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC29.41■■■□□ 2.3
SNRPA1P09661 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
SNRPA1P09661 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SNRPA1P09661 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC29.41■■■□□ 2.3
SNRPA1P09661 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
SNRPA1P09661 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29.41■■■□□ 2.3
SNRPA1P09661 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SNRPA1P09661 AC099791.2-201ENST00000605725 427 ntBASIC29.41■■■□□ 2.3
SNRPA1P09661 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SNRPA1P09661 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC29.41■■■□□ 2.3
SNRPA1P09661 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.4■■■□□ 2.3
SNRPA1P09661 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SNRPA1P09661 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
SNRPA1P09661 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
SNRPA1P09661 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC29.4■■■□□ 2.3
SNRPA1P09661 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SNRPA1P09661 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
SNRPA1P09661 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
SNRPA1P09661 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC29.4■■■□□ 2.3
SNRPA1P09661 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
SNRPA1P09661 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SNRPA1P09661 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SNRPA1P09661 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SNRPA1P09661 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC29.39■■■□□ 2.3
SNRPA1P09661 AL136967.2-201ENST00000623968 743 ntBASIC29.39■■■□□ 2.3
SNRPA1P09661 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
SNRPA1P09661 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
SNRPA1P09661 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
SNRPA1P09661 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SNRPA1P09661 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
SNRPA1P09661 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SNRPA1P09661 SERBP1P1-201ENST00000396021 1160 ntBASIC29.38■■■□□ 2.29
SNRPA1P09661 GRAMD4P4-201ENST00000613563 1115 ntBASIC29.38■■■□□ 2.29
SNRPA1P09661 C17orf82-201ENST00000623772 1530 ntBASIC29.38■■■□□ 2.29
SNRPA1P09661 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SNRPA1P09661 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SNRPA1P09661 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
SNRPA1P09661 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SNRPA1P09661 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SNRPA1P09661 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.37■■■□□ 2.29
SNRPA1P09661 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SNRPA1P09661 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SNRPA1P09661 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SNRPA1P09661 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
SNRPA1P09661 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
SNRPA1P09661 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
SNRPA1P09661 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC29.36■■■□□ 2.29
SNRPA1P09661 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC29.36■■■□□ 2.29
SNRPA1P09661 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SNRPA1P09661 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
SNRPA1P09661 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.36■■■□□ 2.29
SNRPA1P09661 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
SNRPA1P09661 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SNRPA1P09661 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNRPA1P09661 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC29.35■■■□□ 2.29
SNRPA1P09661 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNRPA1P09661 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNRPA1P09661 HYI-206ENST00000372434 1025 ntTSL 5 BASIC29.35■■■□□ 2.29
SNRPA1P09661 AF213884.3-201ENST00000563833 479 ntBASIC29.35■■■□□ 2.29
SNRPA1P09661 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC29.35■■■□□ 2.29
SNRPA1P09661 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNRPA1P09661 MIR939-201ENST00000401314 82 ntBASIC29.34■■■□□ 2.29
SNRPA1P09661 MIR4767-201ENST00000582827 78 ntBASIC29.34■■■□□ 2.29
SNRPA1P09661 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SNRPA1P09661 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SNRPA1P09661 AC022211.4-201ENST00000625094 2161 ntBASIC29.33■■■□□ 2.29
SNRPA1P09661 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.33■■■□□ 2.29
SNRPA1P09661 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.33■■■□□ 2.29
SNRPA1P09661 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.33■■■□□ 2.29
SNRPA1P09661 AP001330.3-201ENST00000520123 633 ntBASIC29.33■■■□□ 2.29
SNRPA1P09661 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
SNRPA1P09661 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SNRPA1P09661 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SNRPA1P09661 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SNRPA1P09661 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC29.33■■■□□ 2.29
SNRPA1P09661 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNRPA1P09661 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms