Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
TPM1P09493 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
TPM1P09493 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TPM1P09493 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TPM1P09493 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TPM1P09493 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TPM1P09493 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TPM1P09493 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TPM1P09493 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
TPM1P09493 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.08■■□□□ 1.61
TPM1P09493 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TPM1P09493 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
TPM1P09493 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
TPM1P09493 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
TPM1P09493 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.07■■□□□ 1.6
TPM1P09493 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
TPM1P09493 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TPM1P09493 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
TPM1P09493 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.07■■□□□ 1.6
TPM1P09493 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TPM1P09493 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TPM1P09493 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.07■■□□□ 1.6
TPM1P09493 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TPM1P09493 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.07■■□□□ 1.6
TPM1P09493 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TPM1P09493 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
TPM1P09493 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
TPM1P09493 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TPM1P09493 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TPM1P09493 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
TPM1P09493 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.06■■□□□ 1.6
TPM1P09493 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
TPM1P09493 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.06■■□□□ 1.6
TPM1P09493 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TPM1P09493 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.06■■□□□ 1.6
TPM1P09493 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
TPM1P09493 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TPM1P09493 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TPM1P09493 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TPM1P09493 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TPM1P09493 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TPM1P09493 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.05■■□□□ 1.6
TPM1P09493 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TPM1P09493 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TPM1P09493 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.05■■□□□ 1.6
TPM1P09493 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
TPM1P09493 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TPM1P09493 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TPM1P09493 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TPM1P09493 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
TPM1P09493 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TPM1P09493 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.04■■□□□ 1.6
TPM1P09493 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
TPM1P09493 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TPM1P09493 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TPM1P09493 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TPM1P09493 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TPM1P09493 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TPM1P09493 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.03■■□□□ 1.6
TPM1P09493 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.03■■□□□ 1.6
TPM1P09493 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TPM1P09493 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.03■■□□□ 1.6
TPM1P09493 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
TPM1P09493 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TPM1P09493 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TPM1P09493 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TPM1P09493 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.03■■□□□ 1.6
TPM1P09493 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
TPM1P09493 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
TPM1P09493 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TPM1P09493 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TPM1P09493 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TPM1P09493 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.02■■□□□ 1.6
TPM1P09493 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TPM1P09493 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
TPM1P09493 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TPM1P09493 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
TPM1P09493 AL161729.1-201ENST00000604104 1402 ntBASIC25.02■■□□□ 1.6
TPM1P09493 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TPM1P09493 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TPM1P09493 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
TPM1P09493 ANOS2P-203ENST00000472227 1816 ntBASIC25.01■■□□□ 1.59
TPM1P09493 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
TPM1P09493 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TPM1P09493 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TPM1P09493 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25■■□□□ 1.59
TPM1P09493 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25■■□□□ 1.59
TPM1P09493 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25■■□□□ 1.59
TPM1P09493 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25■■□□□ 1.59
TPM1P09493 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
TPM1P09493 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
TPM1P09493 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25■■□□□ 1.59
TPM1P09493 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
TPM1P09493 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TPM1P09493 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TPM1P09493 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25■■□□□ 1.59
TPM1P09493 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
TPM1P09493 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.99■■□□□ 1.59
TPM1P09493 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.99■■□□□ 1.59
TPM1P09493 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms