Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.16■□□□□ 0.82
ERCC1P07992 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.16■□□□□ 0.82
ERCC1P07992 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ERCC1P07992 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC1P07992 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC1P07992 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC1P07992 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC1P07992 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ERCC1P07992 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC1P07992 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC1P07992 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
ERCC1P07992 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
ERCC1P07992 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
ERCC1P07992 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ERCC1P07992 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
ERCC1P07992 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC1P07992 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.14■□□□□ 0.81
ERCC1P07992 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.14■□□□□ 0.81
ERCC1P07992 AC004812.2-201ENST00000611079 2094 ntBASIC20.14■□□□□ 0.81
ERCC1P07992 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.14■□□□□ 0.81
ERCC1P07992 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.14■□□□□ 0.81
ERCC1P07992 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC1P07992 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.14■□□□□ 0.81
ERCC1P07992 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC1P07992 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC1P07992 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC1P07992 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.14■□□□□ 0.81
ERCC1P07992 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC1P07992 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC1P07992 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
ERCC1P07992 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC1P07992 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC1P07992 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC1P07992 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC1P07992 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC1P07992 GUSBP5-201ENST00000418136 578 ntBASIC20.13■□□□□ 0.81
ERCC1P07992 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ERCC1P07992 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
ERCC1P07992 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.13■□□□□ 0.81
ERCC1P07992 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC1P07992 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC1P07992 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC1P07992 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC1P07992 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC1P07992 AC120024.1-201ENST00000562672 995 ntBASIC20.12■□□□□ 0.81
ERCC1P07992 AC011551.1-201ENST00000614101 683 ntBASIC20.12■□□□□ 0.81
ERCC1P07992 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ERCC1P07992 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC1P07992 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ERCC1P07992 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.12■□□□□ 0.81
ERCC1P07992 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
ERCC1P07992 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.12■□□□□ 0.81
ERCC1P07992 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.12■□□□□ 0.81
ERCC1P07992 FOXO3B-201ENST00000395675 1928 ntBASIC20.12■□□□□ 0.81
ERCC1P07992 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ERCC1P07992 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC1P07992 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC1P07992 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
ERCC1P07992 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC1P07992 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC1P07992 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ERCC1P07992 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC1P07992 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ERCC1P07992 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ERCC1P07992 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ERCC1P07992 DUSP8P5-201ENST00000422884 1815 ntBASIC20.11■□□□□ 0.81
ERCC1P07992 HLA-L-211ENST00000482052 1765 ntBASIC20.11■□□□□ 0.81
ERCC1P07992 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC1P07992 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC1P07992 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC1P07992 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC1P07992 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC1P07992 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC1P07992 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC1P07992 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.1■□□□□ 0.81
ERCC1P07992 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ERCC1P07992 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ERCC1P07992 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC1P07992 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ERCC1P07992 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC1P07992 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ERCC1P07992 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.09■□□□□ 0.81
ERCC1P07992 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.09■□□□□ 0.81
ERCC1P07992 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC1P07992 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
ERCC1P07992 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ERCC1P07992 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ERCC1P07992 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ERCC1P07992 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.08■□□□□ 0.8
ERCC1P07992 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ERCC1P07992 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ERCC1P07992 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ERCC1P07992 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC1P07992 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ERCC1P07992 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC1P07992 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.07■□□□□ 0.8
ERCC1P07992 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC1P07992 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
ERCC1P07992 MIR4787-201ENST00000607364 84 ntBASIC20.07■□□□□ 0.8
ERCC1P07992 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms