Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.71■■□□□ 1.23
SOD1P00441 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.71■■□□□ 1.23
SOD1P00441 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.71■■□□□ 1.23
SOD1P00441 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.71■■□□□ 1.23
SOD1P00441 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.71■■□□□ 1.23
SOD1P00441 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.71■■□□□ 1.23
SOD1P00441 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SOD1P00441 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SOD1P00441 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SOD1P00441 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SOD1P00441 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SOD1P00441 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.7■■□□□ 1.22
SOD1P00441 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.7■■□□□ 1.22
SOD1P00441 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.7■■□□□ 1.22
SOD1P00441 AC131281.2-201ENST00000520478 145 ntBASIC22.7■■□□□ 1.22
SOD1P00441 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.7■■□□□ 1.22
SOD1P00441 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SOD1P00441 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
SOD1P00441 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SOD1P00441 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SOD1P00441 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
SOD1P00441 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SOD1P00441 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SOD1P00441 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SOD1P00441 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SOD1P00441 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.69■■□□□ 1.22
SOD1P00441 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.69■■□□□ 1.22
SOD1P00441 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
SOD1P00441 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SOD1P00441 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SOD1P00441 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SOD1P00441 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SOD1P00441 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SOD1P00441 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.68■■□□□ 1.22
SOD1P00441 AL356740.2-201ENST00000601559 647 ntBASIC22.68■■□□□ 1.22
SOD1P00441 AL512631.2-201ENST00000604634 923 ntBASIC22.68■■□□□ 1.22
SOD1P00441 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.68■■□□□ 1.22
SOD1P00441 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SOD1P00441 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SOD1P00441 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.67■■□□□ 1.22
SOD1P00441 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SOD1P00441 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.67■■□□□ 1.22
SOD1P00441 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
SOD1P00441 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
SOD1P00441 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
SOD1P00441 AC005703.6-201ENST00000623265 1329 ntBASIC22.67■■□□□ 1.22
SOD1P00441 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SOD1P00441 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.67■■□□□ 1.22
SOD1P00441 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.67■■□□□ 1.22
SOD1P00441 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SOD1P00441 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SOD1P00441 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
SOD1P00441 LINC01124-201ENST00000409786 2117 ntBASIC22.66■■□□□ 1.22
SOD1P00441 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
SOD1P00441 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SOD1P00441 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SOD1P00441 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.66■■□□□ 1.22
SOD1P00441 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SOD1P00441 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SOD1P00441 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.66■■□□□ 1.22
SOD1P00441 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SOD1P00441 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SOD1P00441 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.65■■□□□ 1.22
SOD1P00441 MIR4466-201ENST00000606121 54 ntBASIC22.65■■□□□ 1.22
SOD1P00441 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SOD1P00441 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.65■■□□□ 1.22
SOD1P00441 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.65■■□□□ 1.22
SOD1P00441 LINC00543-201ENST00000567234 1845 ntBASIC22.64■■□□□ 1.22
SOD1P00441 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SOD1P00441 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SOD1P00441 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SOD1P00441 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.64■■□□□ 1.21
SOD1P00441 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.64■■□□□ 1.21
SOD1P00441 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SOD1P00441 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SOD1P00441 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.64■■□□□ 1.21
SOD1P00441 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SOD1P00441 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SOD1P00441 ALDH1A3-203ENST00000557963 1670 ntBASIC22.64■■□□□ 1.21
SOD1P00441 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
SOD1P00441 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SOD1P00441 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SOD1P00441 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SOD1P00441 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
SOD1P00441 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SOD1P00441 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SOD1P00441 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SOD1P00441 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SOD1P00441 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SOD1P00441 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.63■■□□□ 1.21
SOD1P00441 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.63■■□□□ 1.21
SOD1P00441 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SOD1P00441 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SOD1P00441 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.62■■□□□ 1.21
SOD1P00441 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SOD1P00441 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.62■■□□□ 1.21
SOD1P00441 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SOD1P00441 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.62■■□□□ 1.21
SOD1P00441 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SOD1P00441 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms