Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ZNF253O75346 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF253O75346 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF253O75346 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ZNF253O75346 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF253O75346 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF253O75346 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF253O75346 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ZNF253O75346 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
ZNF253O75346 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
ZNF253O75346 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF253O75346 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
ZNF253O75346 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF253O75346 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
ZNF253O75346 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF253O75346 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF253O75346 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF253O75346 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ZNF253O75346 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF253O75346 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF253O75346 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF253O75346 C9orf163-202ENST00000624034 2573 ntBASIC17.67■□□□□ 0.42
ZNF253O75346 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF253O75346 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ZNF253O75346 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ZNF253O75346 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ZNF253O75346 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF253O75346 AC026202.3-201ENST00000600805 1127 ntBASIC17.66■□□□□ 0.42
ZNF253O75346 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF253O75346 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
ZNF253O75346 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
ZNF253O75346 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ZNF253O75346 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZNF253O75346 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF253O75346 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF253O75346 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF253O75346 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF253O75346 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF253O75346 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF253O75346 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF253O75346 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF253O75346 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ZNF253O75346 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF253O75346 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZNF253O75346 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF253O75346 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF253O75346 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF253O75346 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.64■□□□□ 0.41
ZNF253O75346 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF253O75346 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF253O75346 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ZNF253O75346 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ZNF253O75346 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ZNF253O75346 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF253O75346 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF253O75346 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF253O75346 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF253O75346 LINC00565-201ENST00000562710 2331 ntBASIC17.63■□□□□ 0.41
ZNF253O75346 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF253O75346 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF253O75346 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF253O75346 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF253O75346 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF253O75346 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
ZNF253O75346 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF253O75346 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF253O75346 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.62■□□□□ 0.41
ZNF253O75346 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.62■□□□□ 0.41
ZNF253O75346 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF253O75346 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF253O75346 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF253O75346 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.62■□□□□ 0.41
ZNF253O75346 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF253O75346 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF253O75346 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ZNF253O75346 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF253O75346 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF253O75346 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF253O75346 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF253O75346 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF253O75346 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF253O75346 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF253O75346 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ZNF253O75346 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.61■□□□□ 0.41
ZNF253O75346 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF253O75346 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF253O75346 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF253O75346 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF253O75346 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF253O75346 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ZNF253O75346 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF253O75346 ABCB10P4-201ENST00000566803 2184 ntBASIC17.6■□□□□ 0.41
ZNF253O75346 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF253O75346 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF253O75346 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF253O75346 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF253O75346 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF253O75346 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ZNF253O75346 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF253O75346 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms