Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD6O75340 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.3■□□□□ 0.68
PDCD6O75340 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD6O75340 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PDCD6O75340 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD6O75340 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD6O75340 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDCD6O75340 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD6O75340 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD6O75340 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD6O75340 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD6O75340 AC011551.1-201ENST00000614101 683 ntBASIC19.29■□□□□ 0.68
PDCD6O75340 U85056.1-201ENST00000616429 682 ntBASIC19.29■□□□□ 0.68
PDCD6O75340 AC129492.7-201ENST00000622992 756 ntBASIC19.29■□□□□ 0.68
PDCD6O75340 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD6O75340 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PDCD6O75340 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD6O75340 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD6O75340 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD6O75340 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.29■□□□□ 0.68
PDCD6O75340 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD6O75340 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.29■□□□□ 0.68
PDCD6O75340 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.28■□□□□ 0.68
PDCD6O75340 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD6O75340 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.28■□□□□ 0.68
PDCD6O75340 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PDCD6O75340 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD6O75340 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD6O75340 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD6O75340 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.28■□□□□ 0.68
PDCD6O75340 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.28■□□□□ 0.68
PDCD6O75340 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.28■□□□□ 0.68
PDCD6O75340 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD6O75340 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD6O75340 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD6O75340 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PDCD6O75340 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDCD6O75340 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDCD6O75340 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDCD6O75340 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.27■□□□□ 0.68
PDCD6O75340 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.27■□□□□ 0.68
PDCD6O75340 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDCD6O75340 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDCD6O75340 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
PDCD6O75340 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDCD6O75340 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDCD6O75340 AC092068.2-201ENST00000590491 1708 ntBASIC19.26■□□□□ 0.67
PDCD6O75340 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PDCD6O75340 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PDCD6O75340 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PDCD6O75340 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.26■□□□□ 0.67
PDCD6O75340 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDCD6O75340 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDCD6O75340 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDCD6O75340 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.26■□□□□ 0.67
PDCD6O75340 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDCD6O75340 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PDCD6O75340 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDCD6O75340 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDCD6O75340 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
PDCD6O75340 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDCD6O75340 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDCD6O75340 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDCD6O75340 HSD17B1P1-201ENST00000590052 955 ntBASIC19.25■□□□□ 0.67
PDCD6O75340 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDCD6O75340 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.25■□□□□ 0.67
PDCD6O75340 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.25■□□□□ 0.67
PDCD6O75340 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDCD6O75340 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.24■□□□□ 0.67
PDCD6O75340 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PDCD6O75340 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDCD6O75340 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDCD6O75340 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDCD6O75340 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.24■□□□□ 0.67
PDCD6O75340 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDCD6O75340 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDCD6O75340 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDCD6O75340 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.24■□□□□ 0.67
PDCD6O75340 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDCD6O75340 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDCD6O75340 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.23■□□□□ 0.67
PDCD6O75340 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDCD6O75340 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDCD6O75340 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDCD6O75340 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PDCD6O75340 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDCD6O75340 KRT18P60-201ENST00000312876 1297 ntBASIC19.23■□□□□ 0.67
PDCD6O75340 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDCD6O75340 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.23■□□□□ 0.67
PDCD6O75340 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDCD6O75340 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDCD6O75340 DUSP8P3-201ENST00000399571 1760 ntBASIC19.23■□□□□ 0.67
PDCD6O75340 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDCD6O75340 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.23■□□□□ 0.67
PDCD6O75340 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDCD6O75340 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDCD6O75340 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDCD6O75340 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
PDCD6O75340 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDCD6O75340 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms