Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
BRD4O60885 EDA-201ENST00000338901 1233 ntBASIC31.83■■■□□ 2.69
BRD4O60885 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC31.83■■■□□ 2.69
BRD4O60885 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.83■■■□□ 2.69
BRD4O60885 AC135279.3-201ENST00000610945 1311 ntBASIC31.83■■■□□ 2.69
BRD4O60885 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC31.83■■■□□ 2.69
BRD4O60885 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
BRD4O60885 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.69
BRD4O60885 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
BRD4O60885 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.82■■■□□ 2.69
BRD4O60885 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
BRD4O60885 AC142381.2-201ENST00000566120 298 ntBASIC31.82■■■□□ 2.69
BRD4O60885 AL136162.1-201ENST00000607711 1078 ntBASIC31.82■■■□□ 2.69
BRD4O60885 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
BRD4O60885 EED-207ENST00000528180 1745 ntTSL 5 BASIC31.82■■■□□ 2.68
BRD4O60885 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC31.82■■■□□ 2.68
BRD4O60885 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
BRD4O60885 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
BRD4O60885 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
BRD4O60885 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
BRD4O60885 PREB-202ENST00000406567 1910 ntTSL 5 BASIC31.81■■■□□ 2.68
BRD4O60885 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC31.81■■■□□ 2.68
BRD4O60885 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
BRD4O60885 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
BRD4O60885 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
BRD4O60885 ZNRF2P3-201ENST00000424200 374 ntBASIC31.81■■■□□ 2.68
BRD4O60885 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
BRD4O60885 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC31.81■■■□□ 2.68
BRD4O60885 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
BRD4O60885 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
BRD4O60885 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
BRD4O60885 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
BRD4O60885 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
BRD4O60885 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
BRD4O60885 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
BRD4O60885 AC093323.1-202ENST00000635031 2045 ntBASIC31.79■■■□□ 2.68
BRD4O60885 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.79■■■□□ 2.68
BRD4O60885 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC31.79■■■□□ 2.68
BRD4O60885 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.79■■■□□ 2.68
BRD4O60885 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
BRD4O60885 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
BRD4O60885 SF1-220ENST00000626028 704 ntTSL 2 BASIC31.78■■■□□ 2.68
BRD4O60885 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
BRD4O60885 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.78■■■□□ 2.68
BRD4O60885 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
BRD4O60885 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
BRD4O60885 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.77■■■□□ 2.68
BRD4O60885 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
BRD4O60885 RARRES2P6-201ENST00000567333 442 ntBASIC31.77■■■□□ 2.68
BRD4O60885 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
BRD4O60885 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
BRD4O60885 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
BRD4O60885 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.76■■■□□ 2.68
BRD4O60885 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
BRD4O60885 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.76■■■□□ 2.67
BRD4O60885 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
BRD4O60885 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
BRD4O60885 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
BRD4O60885 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
BRD4O60885 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
BRD4O60885 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.75■■■□□ 2.67
BRD4O60885 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.75■■■□□ 2.67
BRD4O60885 AC005703.6-201ENST00000623265 1329 ntBASIC31.75■■■□□ 2.67
BRD4O60885 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
BRD4O60885 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
BRD4O60885 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
BRD4O60885 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC31.74■■■□□ 2.67
BRD4O60885 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
BRD4O60885 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC31.74■■■□□ 2.67
BRD4O60885 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC31.74■■■□□ 2.67
BRD4O60885 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
BRD4O60885 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
BRD4O60885 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
BRD4O60885 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.74■■■□□ 2.67
BRD4O60885 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.74■■■□□ 2.67
BRD4O60885 AC024257.2-201ENST00000549699 147 ntBASIC31.74■■■□□ 2.67
BRD4O60885 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC31.74■■■□□ 2.67
BRD4O60885 DUX4L19-201ENST00000557448 1267 ntBASIC31.74■■■□□ 2.67
BRD4O60885 AL355001.2-201ENST00000620617 1191 ntBASIC31.74■■■□□ 2.67
BRD4O60885 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
BRD4O60885 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
BRD4O60885 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.73■■■□□ 2.67
BRD4O60885 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC31.73■■■□□ 2.67
BRD4O60885 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC31.73■■■□□ 2.67
BRD4O60885 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC31.73■■■□□ 2.67
BRD4O60885 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
BRD4O60885 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC31.72■■■□□ 2.67
BRD4O60885 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
BRD4O60885 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.72■■■□□ 2.67
BRD4O60885 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC31.72■■■□□ 2.67
BRD4O60885 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.72■■■□□ 2.67
BRD4O60885 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.72■■■□□ 2.67
BRD4O60885 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
BRD4O60885 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC31.72■■■□□ 2.67
BRD4O60885 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
BRD4O60885 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
BRD4O60885 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
BRD4O60885 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.71■■■□□ 2.67
BRD4O60885 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
BRD4O60885 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms