Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.86■■□□□ 1.41
MSI1O43347 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
MSI1O43347 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
MSI1O43347 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
MSI1O43347 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.85■■□□□ 1.41
MSI1O43347 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.85■■□□□ 1.41
MSI1O43347 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.85■■□□□ 1.41
MSI1O43347 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
MSI1O43347 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
MSI1O43347 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
MSI1O43347 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MSI1O43347 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
MSI1O43347 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.84■■□□□ 1.41
MSI1O43347 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.84■■□□□ 1.41
MSI1O43347 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.84■■□□□ 1.41
MSI1O43347 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.84■■□□□ 1.41
MSI1O43347 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
MSI1O43347 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
MSI1O43347 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
MSI1O43347 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
MSI1O43347 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
MSI1O43347 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
MSI1O43347 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
MSI1O43347 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.82■■□□□ 1.4
MSI1O43347 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.82■■□□□ 1.4
MSI1O43347 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MSI1O43347 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.82■■□□□ 1.4
MSI1O43347 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSI1O43347 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.82■■□□□ 1.4
MSI1O43347 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.82■■□□□ 1.4
MSI1O43347 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.82■■□□□ 1.4
MSI1O43347 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.82■■□□□ 1.4
MSI1O43347 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.82■■□□□ 1.4
MSI1O43347 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.82■■□□□ 1.4
MSI1O43347 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSI1O43347 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MSI1O43347 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.81■■□□□ 1.4
MSI1O43347 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MSI1O43347 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.81■■□□□ 1.4
MSI1O43347 MIR3621-201ENST00000580529 85 ntBASIC23.81■■□□□ 1.4
MSI1O43347 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
MSI1O43347 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MSI1O43347 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MSI1O43347 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
MSI1O43347 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
MSI1O43347 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MSI1O43347 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MSI1O43347 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.8■■□□□ 1.4
MSI1O43347 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MSI1O43347 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.8■■□□□ 1.4
MSI1O43347 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.8■■□□□ 1.4
MSI1O43347 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.8■■□□□ 1.4
MSI1O43347 AL161729.1-201ENST00000604104 1402 ntBASIC23.8■■□□□ 1.4
MSI1O43347 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.8■■□□□ 1.4
MSI1O43347 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MSI1O43347 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.8■■□□□ 1.4
MSI1O43347 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
MSI1O43347 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
MSI1O43347 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
MSI1O43347 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MSI1O43347 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.8■■□□□ 1.4
MSI1O43347 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MSI1O43347 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.79■■□□□ 1.4
MSI1O43347 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
MSI1O43347 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
MSI1O43347 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
MSI1O43347 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MSI1O43347 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MSI1O43347 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MSI1O43347 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.79■■□□□ 1.4
MSI1O43347 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.79■■□□□ 1.4
MSI1O43347 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.79■■□□□ 1.4
MSI1O43347 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
MSI1O43347 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MSI1O43347 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
MSI1O43347 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
MSI1O43347 AL356740.2-201ENST00000601559 647 ntBASIC23.78■■□□□ 1.4
MSI1O43347 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.78■■□□□ 1.4
MSI1O43347 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.78■■□□□ 1.4
MSI1O43347 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MSI1O43347 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MSI1O43347 AC005703.6-201ENST00000623265 1329 ntBASIC23.78■■□□□ 1.4
MSI1O43347 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MSI1O43347 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MSI1O43347 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.78■■□□□ 1.4
MSI1O43347 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MSI1O43347 LINC00543-201ENST00000567234 1845 ntBASIC23.77■■□□□ 1.4
MSI1O43347 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MSI1O43347 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.77■■□□□ 1.4
MSI1O43347 AC131281.2-201ENST00000520478 145 ntBASIC23.77■■□□□ 1.4
MSI1O43347 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.77■■□□□ 1.4
MSI1O43347 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MSI1O43347 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MSI1O43347 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
MSI1O43347 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MSI1O43347 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
MSI1O43347 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MSI1O43347 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.76■■□□□ 1.39
MSI1O43347 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MSI1O43347 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms