Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC39.97■■■■□ 3.99
CUX2O14529 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC39.97■■■■□ 3.99
CUX2O14529 NCF1B-203ENST00000435988 1254 ntBASIC39.97■■■■□ 3.99
CUX2O14529 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC39.97■■■■□ 3.99
CUX2O14529 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC39.97■■■■□ 3.99
CUX2O14529 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
CUX2O14529 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
CUX2O14529 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC39.96■■■■□ 3.99
CUX2O14529 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC39.96■■■■□ 3.99
CUX2O14529 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC39.96■■■■□ 3.99
CUX2O14529 CROCCP5-201ENST00000436658 830 ntBASIC39.96■■■■□ 3.99
CUX2O14529 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC39.96■■■■□ 3.99
CUX2O14529 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC39.96■■■■□ 3.99
CUX2O14529 PARP1-210ENST00000629232 477 ntTSL 5 BASIC39.96■■■■□ 3.99
CUX2O14529 AC006970.2-201ENST00000450065 779 ntBASIC39.95■■■■□ 3.99
CUX2O14529 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC39.95■■■■□ 3.99
CUX2O14529 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC39.95■■■■□ 3.99
CUX2O14529 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC39.95■■■■□ 3.99
CUX2O14529 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC39.95■■■■□ 3.99
CUX2O14529 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
CUX2O14529 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC39.94■■■■□ 3.98
CUX2O14529 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC39.94■■■■□ 3.98
CUX2O14529 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC39.94■■■■□ 3.98
CUX2O14529 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC39.94■■■■□ 3.98
CUX2O14529 AL354811.1-201ENST00000610286 706 ntBASIC39.94■■■■□ 3.98
CUX2O14529 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC39.93■■■■□ 3.98
CUX2O14529 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC39.93■■■■□ 3.98
CUX2O14529 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC39.92■■■■□ 3.98
CUX2O14529 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC39.92■■■■□ 3.98
CUX2O14529 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC39.91■■■■□ 3.98
CUX2O14529 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
CUX2O14529 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
CUX2O14529 APTR-205ENST00000447009 902 ntTSL 2 BASIC39.91■■■■□ 3.98
CUX2O14529 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
CUX2O14529 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC39.91■■■■□ 3.98
CUX2O14529 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
CUX2O14529 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC39.91■■■■□ 3.98
CUX2O14529 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
CUX2O14529 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC39.91■■■■□ 3.98
CUX2O14529 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC39.91■■■■□ 3.98
CUX2O14529 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC39.9■■■■□ 3.98
CUX2O14529 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC39.9■■■■□ 3.98
CUX2O14529 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
CUX2O14529 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC39.9■■■■□ 3.98
CUX2O14529 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC39.89■■■■□ 3.98
CUX2O14529 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
CUX2O14529 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC39.89■■■■□ 3.98
CUX2O14529 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC39.89■■■■□ 3.98
CUX2O14529 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC39.89■■■■□ 3.98
CUX2O14529 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC39.89■■■■□ 3.98
CUX2O14529 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC39.88■■■■□ 3.98
CUX2O14529 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC39.88■■■■□ 3.97
CUX2O14529 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
CUX2O14529 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC39.88■■■■□ 3.97
CUX2O14529 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC39.88■■■■□ 3.97
CUX2O14529 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
CUX2O14529 AICDA-202ENST00000537228 667 ntTSL 5 BASIC39.88■■■■□ 3.97
CUX2O14529 AC142086.2-201ENST00000569753 217 ntBASIC39.88■■■■□ 3.97
CUX2O14529 AC126544.1-201ENST00000580842 1059 ntBASIC39.88■■■■□ 3.97
CUX2O14529 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC39.88■■■■□ 3.97
CUX2O14529 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC39.87■■■■□ 3.97
CUX2O14529 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
CUX2O14529 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC39.87■■■■□ 3.97
CUX2O14529 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC39.87■■■■□ 3.97
CUX2O14529 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC39.87■■■■□ 3.97
CUX2O14529 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
CUX2O14529 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC39.86■■■■□ 3.97
CUX2O14529 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC39.86■■■■□ 3.97
CUX2O14529 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC39.86■■■■□ 3.97
CUX2O14529 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC39.86■■■■□ 3.97
CUX2O14529 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC39.86■■■■□ 3.97
CUX2O14529 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC39.86■■■■□ 3.97
CUX2O14529 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
CUX2O14529 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC39.85■■■■□ 3.97
CUX2O14529 SNAI3-AS1-204ENST00000567997 2048 ntBASIC39.85■■■■□ 3.97
CUX2O14529 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
CUX2O14529 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC39.85■■■■□ 3.97
CUX2O14529 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC39.85■■■■□ 3.97
CUX2O14529 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC39.84■■■■□ 3.97
CUX2O14529 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC39.84■■■■□ 3.97
CUX2O14529 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC39.84■■■■□ 3.97
CUX2O14529 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
CUX2O14529 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC39.84■■■■□ 3.97
CUX2O14529 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
CUX2O14529 MIR572-201ENST00000384983 95 ntBASIC39.84■■■■□ 3.97
CUX2O14529 KRT18P61-201ENST00000585825 1298 ntBASIC39.84■■■■□ 3.97
CUX2O14529 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC39.84■■■■□ 3.97
CUX2O14529 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC39.83■■■■□ 3.97
CUX2O14529 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC39.83■■■■□ 3.97
CUX2O14529 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC39.83■■■■□ 3.97
CUX2O14529 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC39.82■■■■□ 3.97
CUX2O14529 KRT18P6-201ENST00000555540 1265 ntBASIC39.82■■■■□ 3.97
CUX2O14529 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC39.82■■■■□ 3.97
CUX2O14529 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC39.82■■■■□ 3.97
CUX2O14529 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC39.82■■■■□ 3.97
CUX2O14529 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC39.81■■■■□ 3.96
CUX2O14529 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
CUX2O14529 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC39.81■■■■□ 3.96
CUX2O14529 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
CUX2O14529 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC39.81■■■■□ 3.96
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms