Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.87■■□□□ 1.57
SOX1O00570 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
SOX1O00570 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.86■■□□□ 1.57
SOX1O00570 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.86■■□□□ 1.57
SOX1O00570 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.86■■□□□ 1.57
SOX1O00570 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SOX1O00570 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SOX1O00570 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
SOX1O00570 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SOX1O00570 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SOX1O00570 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SOX1O00570 NCF1B-203ENST00000435988 1254 ntBASIC24.85■■□□□ 1.57
SOX1O00570 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.85■■□□□ 1.57
SOX1O00570 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.85■■□□□ 1.57
SOX1O00570 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
SOX1O00570 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SOX1O00570 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
SOX1O00570 MIR572-201ENST00000384983 95 ntBASIC24.84■■□□□ 1.57
SOX1O00570 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.84■■□□□ 1.57
SOX1O00570 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.84■■□□□ 1.57
SOX1O00570 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SOX1O00570 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.84■■□□□ 1.57
SOX1O00570 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SOX1O00570 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SOX1O00570 AL354811.1-201ENST00000610286 706 ntBASIC24.84■■□□□ 1.57
SOX1O00570 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.84■■□□□ 1.57
SOX1O00570 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SOX1O00570 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
SOX1O00570 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SOX1O00570 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.83■■□□□ 1.57
SOX1O00570 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.83■■□□□ 1.57
SOX1O00570 LINC02228-203ENST00000641970 1355 ntBASIC24.83■■□□□ 1.57
SOX1O00570 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
SOX1O00570 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SOX1O00570 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
SOX1O00570 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
SOX1O00570 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.83■■□□□ 1.57
SOX1O00570 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.83■■□□□ 1.57
SOX1O00570 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SOX1O00570 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
SOX1O00570 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SOX1O00570 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SOX1O00570 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.82■■□□□ 1.56
SOX1O00570 AC241377.3-202ENST00000626088 1088 ntBASIC24.82■■□□□ 1.56
SOX1O00570 AC241585.3-202ENST00000628937 1088 ntBASIC24.82■■□□□ 1.56
SOX1O00570 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.82■■□□□ 1.56
SOX1O00570 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
SOX1O00570 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SOX1O00570 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.81■■□□□ 1.56
SOX1O00570 AC016769.1-201ENST00000409132 1010 ntBASIC24.81■■□□□ 1.56
SOX1O00570 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.81■■□□□ 1.56
SOX1O00570 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
SOX1O00570 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
SOX1O00570 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SOX1O00570 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SOX1O00570 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SOX1O00570 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.8■■□□□ 1.56
SOX1O00570 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.8■■□□□ 1.56
SOX1O00570 AC137761.2-201ENST00000561729 223 ntBASIC24.8■■□□□ 1.56
SOX1O00570 AC145350.3-201ENST00000569033 163 ntBASIC24.8■■□□□ 1.56
SOX1O00570 MIR4651-201ENST00000582622 73 ntBASIC24.8■■□□□ 1.56
SOX1O00570 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.8■■□□□ 1.56
SOX1O00570 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.8■■□□□ 1.56
SOX1O00570 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SOX1O00570 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SOX1O00570 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SOX1O00570 C17orf82-201ENST00000623772 1530 ntBASIC24.8■■□□□ 1.56
SOX1O00570 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SOX1O00570 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SOX1O00570 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.79■■□□□ 1.56
SOX1O00570 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.79■■□□□ 1.56
SOX1O00570 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.79■■□□□ 1.56
SOX1O00570 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.79■■□□□ 1.56
SOX1O00570 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SOX1O00570 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.79■■□□□ 1.56
SOX1O00570 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SOX1O00570 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SOX1O00570 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SOX1O00570 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.77■■□□□ 1.56
SOX1O00570 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SOX1O00570 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SOX1O00570 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SOX1O00570 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC24.77■■□□□ 1.56
SOX1O00570 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SOX1O00570 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SOX1O00570 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SOX1O00570 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.76■■□□□ 1.55
SOX1O00570 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
SOX1O00570 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SOX1O00570 IGHV3-19-201ENST00000521488 291 ntBASIC24.76■■□□□ 1.55
SOX1O00570 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.76■■□□□ 1.55
SOX1O00570 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.76■■□□□ 1.55
SOX1O00570 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SOX1O00570 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.76■■□□□ 1.55
SOX1O00570 AC009086.3-201ENST00000623486 1008 ntBASIC24.76■■□□□ 1.55
SOX1O00570 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
SOX1O00570 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SOX1O00570 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SOX1O00570 KRT18P6-201ENST00000555540 1265 ntBASIC24.75■■□□□ 1.55
SOX1O00570 AC008687.6-201ENST00000596318 630 ntBASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms