Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PITPNM1O00562 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.17■■□□□ 1.62
PITPNM1O00562 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.17■■□□□ 1.62
PITPNM1O00562 MIR6089-201ENST00000616698 64 ntBASIC25.17■■□□□ 1.62
PITPNM1O00562 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
PITPNM1O00562 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PITPNM1O00562 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PITPNM1O00562 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
PITPNM1O00562 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PITPNM1O00562 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PITPNM1O00562 AC092803.2-201ENST00000564287 1899 ntBASIC25.16■■□□□ 1.62
PITPNM1O00562 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
PITPNM1O00562 AC233992.3-201ENST00000607491 485 ntBASIC25.16■■□□□ 1.62
PITPNM1O00562 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PITPNM1O00562 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PITPNM1O00562 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
PITPNM1O00562 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
PITPNM1O00562 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PITPNM1O00562 BX842568.3-201ENST00000418104 571 ntBASIC25.15■■□□□ 1.62
PITPNM1O00562 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
PITPNM1O00562 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.15■■□□□ 1.62
PITPNM1O00562 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PITPNM1O00562 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PITPNM1O00562 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
PITPNM1O00562 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
PITPNM1O00562 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PITPNM1O00562 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC25.14■■□□□ 1.62
PITPNM1O00562 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.61
PITPNM1O00562 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
PITPNM1O00562 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PITPNM1O00562 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PITPNM1O00562 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PITPNM1O00562 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
PITPNM1O00562 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.14■■□□□ 1.61
PITPNM1O00562 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
PITPNM1O00562 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.13■■□□□ 1.61
PITPNM1O00562 SLC6A10P-202ENST00000431994 2058 ntBASIC25.13■■□□□ 1.61
PITPNM1O00562 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PITPNM1O00562 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PITPNM1O00562 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PITPNM1O00562 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.12■■□□□ 1.61
PITPNM1O00562 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PITPNM1O00562 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.12■■□□□ 1.61
PITPNM1O00562 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.12■■□□□ 1.61
PITPNM1O00562 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.12■■□□□ 1.61
PITPNM1O00562 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PITPNM1O00562 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PITPNM1O00562 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.11■■□□□ 1.61
PITPNM1O00562 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PITPNM1O00562 AC006455.2-201ENST00000429931 906 ntBASIC25.11■■□□□ 1.61
PITPNM1O00562 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.11■■□□□ 1.61
PITPNM1O00562 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
PITPNM1O00562 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PITPNM1O00562 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PITPNM1O00562 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PITPNM1O00562 MIR3181-201ENST00000578512 73 ntBASIC25.1■■□□□ 1.61
PITPNM1O00562 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.1■■□□□ 1.61
PITPNM1O00562 AC009086.3-201ENST00000623486 1008 ntBASIC25.1■■□□□ 1.61
PITPNM1O00562 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PITPNM1O00562 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PITPNM1O00562 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.09■■□□□ 1.61
PITPNM1O00562 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.09■■□□□ 1.61
PITPNM1O00562 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PITPNM1O00562 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PITPNM1O00562 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PITPNM1O00562 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PITPNM1O00562 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PITPNM1O00562 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.07■■□□□ 1.6
PITPNM1O00562 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.07■■□□□ 1.6
PITPNM1O00562 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.07■■□□□ 1.6
PITPNM1O00562 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PITPNM1O00562 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PITPNM1O00562 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PITPNM1O00562 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.07■■□□□ 1.6
PITPNM1O00562 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.06■■□□□ 1.6
PITPNM1O00562 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.06■■□□□ 1.6
PITPNM1O00562 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.06■■□□□ 1.6
PITPNM1O00562 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PITPNM1O00562 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.06■■□□□ 1.6
PITPNM1O00562 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PITPNM1O00562 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PITPNM1O00562 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.06■■□□□ 1.6
PITPNM1O00562 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.06■■□□□ 1.6
PITPNM1O00562 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.05■■□□□ 1.6
PITPNM1O00562 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PITPNM1O00562 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
PITPNM1O00562 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.05■■□□□ 1.6
PITPNM1O00562 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PITPNM1O00562 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.05■■□□□ 1.6
PITPNM1O00562 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.05■■□□□ 1.6
PITPNM1O00562 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
PITPNM1O00562 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.04■■□□□ 1.6
PITPNM1O00562 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PITPNM1O00562 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PITPNM1O00562 AC034268.1-201ENST00000441047 882 ntBASIC25.04■■□□□ 1.6
PITPNM1O00562 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.04■■□□□ 1.6
PITPNM1O00562 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.04■■□□□ 1.6
PITPNM1O00562 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PITPNM1O00562 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PITPNM1O00562 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms