Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
CHKB-CPT1BH3BT56 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHKB-CPT1BH3BT56 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHKB-CPT1BH3BT56 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHKB-CPT1BH3BT56 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CHKB-CPT1BH3BT56 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC12.88□□□□□ -0.35
CHKB-CPT1BH3BT56 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHKB-CPT1BH3BT56 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHKB-CPT1BH3BT56 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHKB-CPT1BH3BT56 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CHKB-CPT1BH3BT56 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHKB-CPT1BH3BT56 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHKB-CPT1BH3BT56 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CHKB-CPT1BH3BT56 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHKB-CPT1BH3BT56 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHKB-CPT1BH3BT56 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHKB-CPT1BH3BT56 PREB-202ENST00000406567 1910 ntTSL 5 BASIC12.88□□□□□ -0.35
CHKB-CPT1BH3BT56 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHKB-CPT1BH3BT56 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CHKB-CPT1BH3BT56 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC12.87□□□□□ -0.35
CHKB-CPT1BH3BT56 LINC00565-201ENST00000562710 2331 ntBASIC12.87□□□□□ -0.35
CHKB-CPT1BH3BT56 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHKB-CPT1BH3BT56 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC12.87□□□□□ -0.35
CHKB-CPT1BH3BT56 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHKB-CPT1BH3BT56 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CHKB-CPT1BH3BT56 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHKB-CPT1BH3BT56 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CHKB-CPT1BH3BT56 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHKB-CPT1BH3BT56 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 AC092667.1-201ENST00000434301 2586 ntBASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CHKB-CPT1BH3BT56 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 AC142381.3-201ENST00000568208 1670 ntBASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CHKB-CPT1BH3BT56 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CHKB-CPT1BH3BT56 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
CHKB-CPT1BH3BT56 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
CHKB-CPT1BH3BT56 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CHKB-CPT1BH3BT56 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC12.83□□□□□ -0.36
CHKB-CPT1BH3BT56 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CHKB-CPT1BH3BT56 MED17-227ENST00000640521 2047 ntTSL 5 BASIC12.83□□□□□ -0.36
CHKB-CPT1BH3BT56 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHKB-CPT1BH3BT56 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHKB-CPT1BH3BT56 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHKB-CPT1BH3BT56 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHKB-CPT1BH3BT56 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHKB-CPT1BH3BT56 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHKB-CPT1BH3BT56 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CHKB-CPT1BH3BT56 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHKB-CPT1BH3BT56 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC12.82□□□□□ -0.36
CHKB-CPT1BH3BT56 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHKB-CPT1BH3BT56 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHKB-CPT1BH3BT56 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CHKB-CPT1BH3BT56 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHKB-CPT1BH3BT56 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CHKB-CPT1BH3BT56 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHKB-CPT1BH3BT56 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHKB-CPT1BH3BT56 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CHKB-CPT1BH3BT56 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHKB-CPT1BH3BT56 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHKB-CPT1BH3BT56 AL391422.3-201ENST00000603791 2761 ntBASIC12.82□□□□□ -0.36
CHKB-CPT1BH3BT56 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms