Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
HFM1A2PYH4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC34.28■■■■□ 3.08
HFM1A2PYH4 AC005703.6-201ENST00000623265 1329 ntBASIC34.28■■■■□ 3.08
HFM1A2PYH4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC34.28■■■■□ 3.08
HFM1A2PYH4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
HFM1A2PYH4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC34.28■■■■□ 3.08
HFM1A2PYH4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
HFM1A2PYH4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
HFM1A2PYH4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
HFM1A2PYH4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC34.28■■■■□ 3.08
HFM1A2PYH4 REST-206ENST00000612429 1376 ntTSL 5 BASIC34.27■■■■□ 3.08
HFM1A2PYH4 REST-207ENST00000616975 1370 ntTSL 5 BASIC34.27■■■■□ 3.08
HFM1A2PYH4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
HFM1A2PYH4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
HFM1A2PYH4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC34.27■■■■□ 3.08
HFM1A2PYH4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC34.27■■■■□ 3.08
HFM1A2PYH4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC34.27■■■■□ 3.08
HFM1A2PYH4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC34.26■■■■□ 3.08
HFM1A2PYH4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC34.26■■■■□ 3.08
HFM1A2PYH4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC34.26■■■■□ 3.08
HFM1A2PYH4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
HFM1A2PYH4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC34.26■■■■□ 3.08
HFM1A2PYH4 AC135731.1-201ENST00000569415 2548 ntBASIC34.26■■■■□ 3.07
HFM1A2PYH4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC34.26■■■■□ 3.07
HFM1A2PYH4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC34.26■■■■□ 3.07
HFM1A2PYH4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC34.26■■■■□ 3.07
HFM1A2PYH4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.07
HFM1A2PYH4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC34.26■■■■□ 3.07
HFM1A2PYH4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC34.25■■■■□ 3.07
HFM1A2PYH4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC34.25■■■■□ 3.07
HFM1A2PYH4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC34.25■■■■□ 3.07
HFM1A2PYH4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
HFM1A2PYH4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC34.25■■■■□ 3.07
HFM1A2PYH4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
HFM1A2PYH4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
HFM1A2PYH4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC34.23■■■■□ 3.07
HFM1A2PYH4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
HFM1A2PYH4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
HFM1A2PYH4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
HFM1A2PYH4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
HFM1A2PYH4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
HFM1A2PYH4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
HFM1A2PYH4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC34.22■■■■□ 3.07
HFM1A2PYH4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
HFM1A2PYH4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
HFM1A2PYH4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC34.22■■■■□ 3.07
HFM1A2PYH4 AC008406.3-201ENST00000620001 1374 ntBASIC34.22■■■■□ 3.07
HFM1A2PYH4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC34.21■■■■□ 3.07
HFM1A2PYH4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC34.21■■■■□ 3.07
HFM1A2PYH4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
HFM1A2PYH4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC34.21■■■■□ 3.07
HFM1A2PYH4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
HFM1A2PYH4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
HFM1A2PYH4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
HFM1A2PYH4 AL139125.2-201ENST00000623134 1869 ntBASIC34.2■■■■□ 3.07
HFM1A2PYH4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC34.2■■■■□ 3.06
HFM1A2PYH4 ALDH1A3-203ENST00000557963 1670 ntBASIC34.2■■■■□ 3.06
HFM1A2PYH4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
HFM1A2PYH4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC34.19■■■■□ 3.06
HFM1A2PYH4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC34.19■■■■□ 3.06
HFM1A2PYH4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
HFM1A2PYH4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
HFM1A2PYH4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC34.18■■■■□ 3.06
HFM1A2PYH4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC34.18■■■■□ 3.06
HFM1A2PYH4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC34.18■■■■□ 3.06
HFM1A2PYH4 AL136116.3-201ENST00000402907 1138 ntBASIC34.18■■■■□ 3.06
HFM1A2PYH4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
HFM1A2PYH4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
HFM1A2PYH4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
HFM1A2PYH4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
HFM1A2PYH4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
HFM1A2PYH4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
HFM1A2PYH4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
HFM1A2PYH4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
HFM1A2PYH4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
HFM1A2PYH4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
HFM1A2PYH4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
HFM1A2PYH4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
HFM1A2PYH4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC34.16■■■■□ 3.06
HFM1A2PYH4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
HFM1A2PYH4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC34.16■■■■□ 3.06
HFM1A2PYH4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC34.15■■■■□ 3.06
HFM1A2PYH4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
HFM1A2PYH4 AC141586.4-201ENST00000624558 1573 ntBASIC34.14■■■■□ 3.06
HFM1A2PYH4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC34.14■■■■□ 3.06
HFM1A2PYH4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC34.13■■■■□ 3.05
HFM1A2PYH4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC34.13■■■■□ 3.05
HFM1A2PYH4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
HFM1A2PYH4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC34.13■■■■□ 3.05
HFM1A2PYH4 LINC00543-201ENST00000567234 1845 ntBASIC34.13■■■■□ 3.05
HFM1A2PYH4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC34.13■■■■□ 3.05
HFM1A2PYH4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC34.13■■■■□ 3.05
HFM1A2PYH4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
HFM1A2PYH4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC34.12■■■■□ 3.05
HFM1A2PYH4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
HFM1A2PYH4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC34.12■■■■□ 3.05
HFM1A2PYH4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
HFM1A2PYH4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC34.11■■■■□ 3.05
HFM1A2PYH4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC34.11■■■■□ 3.05
HFM1A2PYH4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms