Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.91■■□□□ 1.1
RNF103-CHMP3A0A140T963 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF103-CHMP3A0A140T963 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.9■■□□□ 1.1
RNF103-CHMP3A0A140T963 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF103-CHMP3A0A140T963 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF103-CHMP3A0A140T963 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF103-CHMP3A0A140T963 DUX4L9-201ENST00000449051 1259 ntBASIC21.9■■□□□ 1.1
RNF103-CHMP3A0A140T963 MIR6765-201ENST00000614092 87 ntBASIC21.9■■□□□ 1.1
RNF103-CHMP3A0A140T963 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
RNF103-CHMP3A0A140T963 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF103-CHMP3A0A140T963 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF103-CHMP3A0A140T963 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RNF103-CHMP3A0A140T963 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF103-CHMP3A0A140T963 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF103-CHMP3A0A140T963 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF103-CHMP3A0A140T963 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
RNF103-CHMP3A0A140T963 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF103-CHMP3A0A140T963 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
RNF103-CHMP3A0A140T963 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF103-CHMP3A0A140T963 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
RNF103-CHMP3A0A140T963 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
RNF103-CHMP3A0A140T963 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF103-CHMP3A0A140T963 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF103-CHMP3A0A140T963 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF103-CHMP3A0A140T963 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.88■■□□□ 1.09
RNF103-CHMP3A0A140T963 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF103-CHMP3A0A140T963 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RNF103-CHMP3A0A140T963 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF103-CHMP3A0A140T963 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF103-CHMP3A0A140T963 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF103-CHMP3A0A140T963 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF103-CHMP3A0A140T963 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF103-CHMP3A0A140T963 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF103-CHMP3A0A140T963 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.87■■□□□ 1.09
RNF103-CHMP3A0A140T963 U85056.1-201ENST00000616429 682 ntBASIC21.87■■□□□ 1.09
RNF103-CHMP3A0A140T963 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF103-CHMP3A0A140T963 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF103-CHMP3A0A140T963 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF103-CHMP3A0A140T963 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF103-CHMP3A0A140T963 AL117328.2-201ENST00000624617 1940 ntBASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 AC087393.1-201ENST00000582896 145 ntBASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF103-CHMP3A0A140T963 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF103-CHMP3A0A140T963 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF103-CHMP3A0A140T963 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF103-CHMP3A0A140T963 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF103-CHMP3A0A140T963 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF103-CHMP3A0A140T963 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.85■■□□□ 1.09
RNF103-CHMP3A0A140T963 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF103-CHMP3A0A140T963 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF103-CHMP3A0A140T963 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF103-CHMP3A0A140T963 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF103-CHMP3A0A140T963 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF103-CHMP3A0A140T963 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF103-CHMP3A0A140T963 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF103-CHMP3A0A140T963 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF103-CHMP3A0A140T963 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RNF103-CHMP3A0A140T963 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.84■■□□□ 1.09
RNF103-CHMP3A0A140T963 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RNF103-CHMP3A0A140T963 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RNF103-CHMP3A0A140T963 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF103-CHMP3A0A140T963 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF103-CHMP3A0A140T963 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
RNF103-CHMP3A0A140T963 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF103-CHMP3A0A140T963 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
RNF103-CHMP3A0A140T963 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF103-CHMP3A0A140T963 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RNF103-CHMP3A0A140T963 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF103-CHMP3A0A140T963 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF103-CHMP3A0A140T963 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF103-CHMP3A0A140T963 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
RNF103-CHMP3A0A140T963 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
RNF103-CHMP3A0A140T963 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF103-CHMP3A0A140T963 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF103-CHMP3A0A140T963 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF103-CHMP3A0A140T963 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF103-CHMP3A0A140T963 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF103-CHMP3A0A140T963 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF103-CHMP3A0A140T963 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF103-CHMP3A0A140T963 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF103-CHMP3A0A140T963 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF103-CHMP3A0A140T963 AC129492.7-201ENST00000622992 756 ntBASIC21.81■■□□□ 1.08
RNF103-CHMP3A0A140T963 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF103-CHMP3A0A140T963 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RNF103-CHMP3A0A140T963 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF103-CHMP3A0A140T963 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF103-CHMP3A0A140T963 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF103-CHMP3A0A140T963 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
RNF103-CHMP3A0A140T963 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms