Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV27A0A0K0K1C4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV27A0A0K0K1C4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV27A0A0K0K1C4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV27A0A0K0K1C4 AC127496.7-201ENST00000625110 1798 ntBASIC16.18■□□□□ 0.18
TRBV27A0A0K0K1C4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV27A0A0K0K1C4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV27A0A0K0K1C4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV27A0A0K0K1C4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV27A0A0K0K1C4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV27A0A0K0K1C4 LINC00526-201ENST00000581067 1875 ntBASIC16.18■□□□□ 0.18
TRBV27A0A0K0K1C4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV27A0A0K0K1C4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV27A0A0K0K1C4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV27A0A0K0K1C4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 GUSBP5-202ENST00000510805 1989 ntBASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 AC007029.1-201ENST00000604183 313 ntBASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 RAP2CP1-202ENST00000605179 643 ntBASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV27A0A0K0K1C4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV27A0A0K0K1C4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRBV27A0A0K0K1C4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
TRBV27A0A0K0K1C4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRBV27A0A0K0K1C4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV27A0A0K0K1C4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV27A0A0K0K1C4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 ECEL1P1-201ENST00000373592 1742 ntBASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 ABHD17AP4-201ENST00000411545 909 ntBASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 AC026202.3-201ENST00000600805 1127 ntBASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV27A0A0K0K1C4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 AC090877.2-201ENST00000558441 1738 ntBASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV27A0A0K0K1C4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 AC137767.1-201ENST00000602918 1920 ntBASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV27A0A0K0K1C4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms