Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV4A0A0B4J268 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
TRAV4A0A0B4J268 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV4A0A0B4J268 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV4A0A0B4J268 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV4A0A0B4J268 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV4A0A0B4J268 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV4A0A0B4J268 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV4A0A0B4J268 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV4A0A0B4J268 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRAV4A0A0B4J268 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV4A0A0B4J268 ABCB10P4-201ENST00000566803 2184 ntBASIC16.41■□□□□ 0.22
TRAV4A0A0B4J268 AC012676.1-201ENST00000574705 1949 ntBASIC16.41■□□□□ 0.22
TRAV4A0A0B4J268 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV4A0A0B4J268 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV4A0A0B4J268 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV4A0A0B4J268 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRAV4A0A0B4J268 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRAV4A0A0B4J268 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV4A0A0B4J268 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV4A0A0B4J268 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV4A0A0B4J268 AL022069.1-201ENST00000568025 1636 ntBASIC16.41■□□□□ 0.22
TRAV4A0A0B4J268 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV4A0A0B4J268 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV4A0A0B4J268 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV4A0A0B4J268 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV4A0A0B4J268 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAV4A0A0B4J268 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV4A0A0B4J268 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
TRAV4A0A0B4J268 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV4A0A0B4J268 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV4A0A0B4J268 AC010980.1-201ENST00000587192 1142 ntBASIC16.38■□□□□ 0.21
TRAV4A0A0B4J268 AC079834.2-201ENST00000609776 1949 ntBASIC16.38■□□□□ 0.21
TRAV4A0A0B4J268 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV4A0A0B4J268 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV4A0A0B4J268 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV4A0A0B4J268 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 AC120024.1-201ENST00000562672 995 ntBASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 THA1P-201ENST00000590384 1145 ntBASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV4A0A0B4J268 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV4A0A0B4J268 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV4A0A0B4J268 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV4A0A0B4J268 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV4A0A0B4J268 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV4A0A0B4J268 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV4A0A0B4J268 KRT18P24-201ENST00000344739 1156 ntBASIC16.36■□□□□ 0.21
TRAV4A0A0B4J268 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.36■□□□□ 0.21
TRAV4A0A0B4J268 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV4A0A0B4J268 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV4A0A0B4J268 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV4A0A0B4J268 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV4A0A0B4J268 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV4A0A0B4J268 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV4A0A0B4J268 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV4A0A0B4J268 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV4A0A0B4J268 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV4A0A0B4J268 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV4A0A0B4J268 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV4A0A0B4J268 PVT1_1.1-201ENST00000615125 194 ntBASIC16.35■□□□□ 0.21
TRAV4A0A0B4J268 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms