Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.29■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.29■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.29■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.29■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.28■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.28■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.27■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.27■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.27■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.27■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.26■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.25■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.25■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.25■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.24■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.24■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 AL031848.2-201ENST00000607670 837 ntBASIC20.24■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.24■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.23■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.23■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.23■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 ALDH1A3-203ENST00000557963 1670 ntBASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.21■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.21■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.21■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.21■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
IGKV1D-43A0A0B4J1Z2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 RARRES2P1-201ENST00000474487 481 ntBASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IGKV1D-43A0A0B4J1Z2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms